RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CLEC7AQ9BXN2 247 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 C20orf85Q9H1P6 137 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 POLR3KQ9Y2Y1 108 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 NAP1L6A6NFF2 107 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 J3QR06 171 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 RGS11O94810 467 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 TCRBP04435 133 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 IGHV4-38-2P0DP08 117 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 PRTN3P24158 256 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 HCP5Q6MZN7 132 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 LHFPL1Q86WI0 220 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 ADAD2Q8NCV1 583 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 C17orf50Q8WW18 174 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 C7orf50Q9BRJ6 194 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 IFI27L2Q9H2X8 130 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 SOX21Q9Y651 276 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 MXRA5Q9NR99 2828 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 SAA2-SAA4A0A096LPE2 208 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 SAA2P0DJI9 122 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 AKR1C4P17516 323 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 ANXA7P20073 488 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 GPR12P47775 334 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 TRIM16LQ309B1 348 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 OR2B11Q5JQS5 317 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 ZNF439Q8NDP4 499 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 CAPSLQ8WWF8 208 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 EDARADDQ8WWZ3 215 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 HILPDAQ9Y5L2 63 aa12.54□□□□□ -0.4
PDLIM5-202ENST00000318007 GNRHRP30968 328 aa12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 CCBE1Q6UXH8 406 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 OR52M1Q8NGK5 317 aa12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 OR9G1Q8NH87 305 aa12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 C5orf66Q9H5L9 145 aa12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 SLC2A8Q9NY64 477 aa12.53□□□□□ -0.4
PDLIM5-202ENST00000318007 CENPVL3A0A0U1RRI6 287 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 NDUFB6O95139 128 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 IGLV2-14P01704 120 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 ABCA11PQ4W5N1 156 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 LDLRAD2Q5SZI1 272 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 PLET1Q6UQ28 207 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 GLDNQ6ZMI3 551 aaPredicted RBP12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 OR10A7Q8NGE5 316 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 OR51H1Q8NH63 302 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 C1orf159Q96HA4 380 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 C18orf12Q96KH6 178 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 HEXA-AS1Q9H8Q6 139 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 SDHAF2Q9NX18 166 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 PRR13Q9NZ81 148 aa12.52□□□□□ -0.4
PDLIM5-202ENST00000318007 PTTG1O95997 202 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 RBP4P02753 201 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 PIGPP57054 158 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 ODF3L1Q8IXM7 274 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 DRAM1Q8N682 238 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 ZNF221Q9UK13 617 aa12.52□□□□□ -0.41
PDLIM5-202ENST00000318007 KRTAP1-1Q07627 177 aa12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 HLA-DRB5Q30154 266 aa12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 DEDD2Q8WXF8 326 aa12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 YAE1D1Q9NRH1 226 aa12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 C14orf166Q9Y224 244 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-202ENST00000318007 A0A087X0M5 115 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 IGHV3-72A0A0B4J1Y9 119 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 A0A1B0GX30 115 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 M0R1X1 148 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 SAA4P35542 130 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 LGALS4P56470 323 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 SSX2Q16385 188 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 OR52B4Q8NGK2 314 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 PROP1O75360 226 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 VAMP1P23763 118 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 CD24P25063 80 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 RAB7AP51149 207 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 PRRX1P54821 245 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 UBE2MP61081 183 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 SP6Q3SY56 376 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 GPR157Q5UAW9 335 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 ZNF626Q68DY1 528 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 SLC38A6Q8IZM9 456 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 SLC25A21Q9BQT8 299 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 COPZ2Q9P299 210 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 GPR132Q9UNW8 380 aa12.5□□□□□ -0.41
PDLIM5-202ENST00000318007 hCG_2014768A0A024R1R8 64 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 RAB29O14966 203 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms