RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 CDKN1AP38936 164 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 PIGPP57054 158 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 EBLN2Q6P2I7 272 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 SLC51BQ86UW2 128 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 LINC01356Q8N9X3 169 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 OR1L8Q8NGR8 309 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 KLF2Q9Y5W3 355 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 IGHV1-18A0A0C4DH31 117 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 C17orf100A8MU93 164 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 CYB5R3P00387 301 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 AGAP20933 346 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 PSMB6P28072 239 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ATP5G2Q06055 141 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 DHRS2Q13268 280 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ABHD14BQ96IU4 210 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 MEGF10Q96KG7 1140 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 RANGRFQ9HD47 186 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 HILPDAQ9Y5L2 63 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 BOLA2-SMG1P6H3BVE0 249 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 DVL1O14640 695 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 S100A4P26447 101 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 MPV17P39210 176 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 DVL1P1P54792 670 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ZP1P60852 638 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ARF6P62330 175 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 LCN2P80188 198 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 STPG3Q8N7X2 389 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 MITD1Q8WV92 249 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ARPC5LQ9BPX5 153 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 PEMTQ9UBM1 199 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 OR2W1Q9Y3N9 320 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 PPYP01298 95 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 PAX6P26367 422 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 LY6EQ16553 131 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 P2RX4Q99571 388 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 GFI1Q99684 422 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 TIMM8BQ9Y5J9 83 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 TAGLN2P37802 199 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 FOXF2Q12947 444 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 OVCH2Q7RTZ1 564 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 SMIM3Q9BZL3 60 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 CDS2O95674 445 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF154Q13106 437 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 IZUMO4Q1ZYL8 232 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 DNM1P46Q6ZS02 220 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 Q6ZS49 121 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 FAM219AQ8IW50 185 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 FGFBP3Q8TAT2 258 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 NEURL2Q9BR09 285 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 GPR132Q9UNW8 380 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 CLEC18AA5D8T8 446 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 SOX15O60248 233 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF250P15622 560 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 DEFA5Q01523 94 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 ANKRD55Q3KP44 614 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 UNQ5815/PRO19632Q6UWF5 114 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 MMD2Q8IY49 270 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 CLEC18CQ8NCF0 446 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 OR5M8Q8NGP6 311 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 NRIP2Q9BQI9 281 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 TRBV6-6A0A0A6YYG2 114 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 C9orf170A2RU37 121 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 HMSDA8MTL9 139 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 WNT5AP41221 380 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 MEF2CQ06413 473 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 PIGYQ3MUY2 71 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 IL22RA2Q969J5 263 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 R3HDM4Q96D70 268 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 RAX2Q96IS3 184 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 TAF9BQ9HBM6 251 aa7.26□□□□□ -1.25
PDLIM5-201ENST00000317968 E5RGE8 158 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 ARPC5O15511 151 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 CMC4P56277 68 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 FLI1Q01543 452 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 ACOT7LQ6ZUV0 252 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 OR52M1Q8NGK5 317 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 NCOR1P1Q9H4R4 102 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 Q9N2K0 584 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 NSG2Q9Y328 171 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 FAM215AQ9Y5M1 114 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 SYNGR1O43759 233 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 S100A11P31949 105 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 GALR1P47211 349 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 LURAP1Q96LR2 239 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 IFT22Q9H7X7 185 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF835Q9Y2P0 537 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 A8MV72 311 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 HIST1H1EP10412 219 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 NQO2P16083 231 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF474Q6S9Z5 364 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 ABHD12Q8N2K0 398 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 TMPRSS13Q9BYE2 586 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 A0A0G2JNJ9 132 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 OR2H2O95918 312 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 S100A8P05109 93 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 SPNP16150 400 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 FOXG1P55316 489 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms