RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FAM90A12PA8MX19 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A5PA8MXJ8 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A23PA8MXZ1 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 CDIPTO14735 213 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 NAPSAO96009 420 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 MMP7P09237 267 aaPredicted RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A15PP0C7V4 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A13PP0C7W8 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A14PP0C7W9 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A24PP0C7X0 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FIP1L1Q6UN15 594 aaKnown RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 ABHD14BQ96IU4 210 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 VAX2Q9UIW0 290 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 LRRC3CA6NJW4 275 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 CDX4O14627 284 aaPredicted RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 LYZL6O75951 148 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 Q0VFX4 171 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 GAMTQ14353 236 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 TMEM241Q24JQ0 296 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 MEGF10Q96KG7 1140 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 TTTY12Q9BZ98 90 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM234AQ9H0X4 552 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 OPA3Q9H6K4 179 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 AURKAIP1Q9NWT8 199 aaPredicted RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 TREM2Q9NZC2 230 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 DUSP13Q9UII6 198 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 CXorf65A6NEN9 183 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 B4DEV8 164 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 CYB5R3P00387 301 aaPredicted RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 CYC1P08574 325 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 SELEP16581 610 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 Q6ZRM9 215 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 MRGPRGQ86SM5 289 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 MRPL41Q8IXM3 137 aaKnown RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 OR8G5Q8NG78 346 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 MRPL30Q8TCC3 161 aaKnown RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 PINX1Q96BK5 328 aaKnown RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 RTL8AQ9BWD3 113 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 GPR87Q9BY21 358 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF71Q9NQZ8 489 aaPredicted RBP8.95□□□□□ -0.98
COL3A1-202ENST00000317840 ATG2AQ2TAZ0 1938 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 LILRA1O75019 489 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
COL3A1-202ENST00000317840 PTBP3O95758 552 aaKnown RBP8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OPN1MWP04001 364 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 SOD3P08294 240 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OPN1MW2P0DN77 364 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OPN1MW3P0DN78 364 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 ABLIM2Q6H8Q1 611 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 C1QL4Q86Z23 238 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OR10P1Q8NGE3 313 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OR13D1Q8NGV5 346 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 RFESDQ8TAC1 157 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 PRSS50Q9UI38 385 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 A0A087WWC5 75 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OR5B21A6NL26 309 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 FGF7P21781 194 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 UBE2G2P60604 165 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 BSXQ3C1V8 233 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OR10A7Q8NGE5 316 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 EDARADDQ8WWZ3 215 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OR2D2Q9H210 308 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 FZR1Q9UM11 496 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 WASF3Q9UPY6 502 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 A0A1B0GW64 132 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 LRP5LA4QPB2 252 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF729A6NN14 1252 aaPredicted RBP8.94□□□□□ -0.98
COL3A1-202ENST00000317840 RNF212BA8MTL3 300 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 IGHV2-70P01814 119 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 G6PCP35575 357 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 OR3A1P47881 315 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 TGFBR3Q03167 851 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 CLN8Q9UBY8 286 aa8.94□□□□□ -0.98
COL3A1-202ENST00000317840 SH2D1BO14796 132 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 SP1P08047 785 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 CATR1Q13166 79 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 BTNL3Q6UXE8 466 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 FGFRL1Q8N441 504 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 TINAGQ9UJW2 476 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 POLDIP2Q9Y2S7 368 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 MPC1Q9Y5U8 109 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 A0A087X0M5 115 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 TRAV24A0A0B4J272 114 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 A0A1B0GX30 115 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 A0A1W2PPV4 95 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 CHRNA7P36544 502 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 GALR1P47211 349 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 CEBPDP49716 269 aaPredicted RBP8.93□□□□□ -0.98
COL3A1-202ENST00000317840 PAX9P55771 341 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 FFAR4Q5NUL3 377 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 DPPA3Q6W0C5 159 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 Q6ZSR3 168 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 OR10G4Q8NGN3 311 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 OR10G9Q8NGN4 311 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 OR10G7Q8NGN6 311 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 IL22RA2Q969J5 263 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 SSX3Q99909 188 aa8.93□□□□□ -0.98
COL3A1-202ENST00000317840 IGF2RP11717 2491 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms