RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 AGAP20933 346 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 PGLYRP3Q96LB9 341 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 GNRHR2Q96P88 292 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 ELOVL5Q9NYP7 299 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 GLIPR1P48060 266 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 JOSD1Q15040 202 aaPredicted RBP7.65□□□□□ -1.18
USF3-201ENST00000316407 PABPC1L2AQ5JQF8 200 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 OR10AG1Q8NH19 301 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 ZDHHC16Q969W1 377 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 ALG1L2C9J202 215 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 SEC11BP0C7V7 166 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 PTPMT1Q8WUK0 201 aaPredicted RBP7.65□□□□□ -1.19
USF3-201ENST00000316407 LRRC29Q8WV35 223 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 DENND4AQ7Z401 1863 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 IMMP2LQ96T52 175 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 HPRT1P00492 218 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 ERGP11308 486 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 HSPB7Q9UBY9 170 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 TRPM3Q9HCF6 1732 aaPredicted RBP7.65□□□□□ -1.19
USF3-201ENST00000316407 PSG6Q00889 435 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 NHLRC3Q5JS37 347 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 TMEM91Q6ZNR0 172 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 BEND2Q8NDZ0 799 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 RND1Q92730 232 aa7.65□□□□□ -1.19
USF3-201ENST00000316407 NUBP1P53384 320 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 OR52M1Q8NGK5 317 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 SPSB1Q96BD6 273 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 CITED1Q99966 193 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 OR51B2Q9Y5P1 312 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 TMEM265A0A087WTH1 108 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 H3BUT2 72 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 PLPP3O14495 311 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 ISG15P05161 165 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 MUC21Q5SSG8 566 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 JKAMPQ9P055 326 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 SIPA1L3O60292 1781 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 PQLC2LA1A4F0 135 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 NPIPB8E9PQR5 432 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 NPIPB9F8W1W9 429 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 H3BTX0 84 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 NPIPB7O75200 414 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 ZNF766Q5HY98 468 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 ATRAIDQ6UW56 229 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 WDR54Q9H977 334 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 TMEM30AQ9NV96 361 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 REG1BP48304 166 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 ASCL4Q6XD76 172 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 MRPS18BQ9Y676 258 aaKnown RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 PPIAL4DF5H284 164 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 TBX6O95947 436 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 DNAL4O96015 105 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 ZNF32P17041 273 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 PDFQ9HBH1 243 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 IGKV3OR2-268A0A0C4DH90 116 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 NRTNQ99748 197 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 RABAC1Q9UI14 185 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 EP300Q09472 2414 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 PPIHO43447 177 aaKnown RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 FKBP2P26885 142 aaKnown RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 MIC13Q5XKP0 118 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 C6orf15Q6UXA7 325 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 TARM1B6A8C7 271 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 FRMPD3Q5JV73 1810 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 A1L4Q6 167 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 TNFSF10P50591 281 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 FOXA3P55318 350 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 C16orf47Q6ZP98 133 aaPredicted RBP7.64□□□□□ -1.19
USF3-201ENST00000316407 ASB10Q8WXI3 467 aa7.64□□□□□ -1.19
USF3-201ENST00000316407 CCR5P51681 352 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 C10orf111Q8N326 155 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 HMGCLL1Q8TB92 370 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 ZNF296Q8WUU4 475 aaPredicted RBP7.63□□□□□ -1.19
USF3-201ENST00000316407 STRCQ7RTU9 1775 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 A0A0U1RQV5 110 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 NDUFB3O43676 98 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 C1QTNF9BB2RNN3 333 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 CAPZBP47756 277 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 COX19Q49B96 90 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 PRRT4C9JH25 899 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 GPR6P46095 362 aaPredicted RBP7.63□□□□□ -1.19
USF3-201ENST00000316407 CXCL12P48061 93 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 DMKNQ6E0U4 476 aaPredicted RBP7.63□□□□□ -1.19
USF3-201ENST00000316407 TMEM108Q6UXF1 575 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 ZADH2Q8N4Q0 377 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 GALNT14Q96FL9 552 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 HCFC2Q9Y5Z7 792 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 MPTX1A8MV57 137 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 ZNHIT1O43257 154 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 RND3P61587 244 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 ZNF441Q8N8Z8 693 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 WNT16Q9UBV4 365 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 GRAMD2BQ96HH9 432 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
USF3-201ENST00000316407 TMEM189A5PLL7 270 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms