RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 DEFA4P12838 97 aa12.65□□□□□ -0.38
TFE3-201ENST00000315869 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
TFE3-201ENST00000315869 SSX9Q7RTT3 188 aa12.65□□□□□ -0.38
TFE3-201ENST00000315869 OR4F5Q8NH21 305 aa12.65□□□□□ -0.38
TFE3-201ENST00000315869 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
TFE3-201ENST00000315869 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
TFE3-201ENST00000315869 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
TFE3-201ENST00000315869 CEBPDP49716 269 aaPredicted RBP12.65□□□□□ -0.39
TFE3-201ENST00000315869 PCSK4Q6UW60 755 aa12.65□□□□□ -0.39
TFE3-201ENST00000315869 TREM2Q9NZC2 230 aa12.65□□□□□ -0.39
TFE3-201ENST00000315869 RNF115Q9Y4L5 304 aa12.65□□□□□ -0.39
TFE3-201ENST00000315869 CD55P08174 381 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 OR5A2Q8NGI9 324 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 ABHD5Q8WTS1 349 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 ZNF318Q5VUA4 2279 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 H7BYZ3 331 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 TMEM164Q5U3C3 297 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 SSX7Q7RTT5 188 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 SDSLQ96GA7 329 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 RIMS4Q9H426 269 aaPredicted RBP12.64□□□□□ -0.39
TFE3-201ENST00000315869 PARD6AQ9NPB6 346 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 NCKAP5O14513 1909 aa12.64□□□□□ -0.39
TFE3-201ENST00000315869 A0A087WWC5 75 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
TFE3-201ENST00000315869 CDIPTO14735 213 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 IL2RGP31785 369 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 RTP5Q14D33 572 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A2PQ658T7 463 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 TMPRSS7Q7RTY8 843 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 ZNF709Q8N972 641 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 SH2D2AQ9NP31 389 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 CLN8Q9UBY8 286 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 PCSK5Q92824 1860 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 CACNA1AO00555 2505 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 A0A0U1RQK1 487 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 B4E171 279 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 TSTD3H0UI37 97 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 TSPAN7P41732 249 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 PLA2G2CQ5R387 149 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 SOX15O60248 233 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 CYB5R3P00387 301 aaPredicted RBP12.63□□□□□ -0.39
TFE3-201ENST00000315869 G6PCP35575 357 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 OR8G1Q15617 311 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 ZNF324BQ6AW86 544 aaPredicted RBP12.63□□□□□ -0.39
TFE3-201ENST00000315869 ZNF66Q6ZN08 573 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 ZNF525Q8N782 197 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 OR8G5Q8NG78 346 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 SPSB4Q96A44 273 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 ABHD14BQ96IU4 210 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 DEFB127Q9H1M4 99 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 PRSS50Q9UI38 385 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 VAX2Q9UIW0 290 aa12.63□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 HOXA4Q00056 320 aaPredicted RBP12.62□□□□□ -0.39
TFE3-201ENST00000315869 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM53AQ6NSI3 398 aaPredicted RBP12.62□□□□□ -0.39
TFE3-201ENST00000315869 BTNL3Q6UXE8 466 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 NUFIP2Q7Z417 695 aaKnown RBP12.62□□□□□ -0.39
TFE3-201ENST00000315869 HIST3H2BBQ8N257 126 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 RFESDQ8TAC1 157 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 PTBP3O95758 552 aaKnown RBP12.62□□□□□ -0.39
TFE3-201ENST00000315869 LMO1P25800 156 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 UBE2G2P60604 165 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 ZNF726P1Q15940 193 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 C16orf82Q7Z2V1 217 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 FAM234AQ9H0X4 552 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 LIN7CQ9NUP9 197 aaKnown RBP12.62□□□□□ -0.39
TFE3-201ENST00000315869 PPP5D1E7EU14 171 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 IGKV1-39P01597 117 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 IGKV1D-39P04432 117 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 PSMB3P49720 205 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 TMEM241Q24JQ0 296 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 CST9LP1Q5W188 147 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 GATAD1Q8WUU5 269 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 NINJ1Q92982 152 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 WFIKKN1Q96NZ8 548 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 KCNIP1Q9NZI2 227 aa12.62□□□□□ -0.39
TFE3-201ENST00000315869 MAP1AP78559 2803 aaPredicted RBP12.61□□□□□ -0.39
TFE3-201ENST00000315869 TFF1P04155 84 aa12.61□□□□□ -0.39
TFE3-201ENST00000315869 SERPINA7P05543 415 aa12.61□□□□□ -0.39
TFE3-201ENST00000315869 EGR1P18146 543 aa12.61□□□□□ -0.39
TFE3-201ENST00000315869 OR3A1P47881 315 aa12.61□□□□□ -0.39
TFE3-201ENST00000315869 DBX2Q6ZNG2 339 aa12.61□□□□□ -0.39
TFE3-201ENST00000315869 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms