RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CCL3P10147 92 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 LIMS1P48059 325 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 EMP1P54849 157 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 ZP4Q12836 540 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 PQLC2LA1A4F0 135 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 SRIP30626 198 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 C3AR1Q16581 482 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 INO80CQ6PI98 192 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-201ENST00000312413 ZNF488Q96MN9 340 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 A0A1W2PP11 408 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 CLDN14O95500 239 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 FGF12P61328 243 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 FAM27BQ5VT28 67 aa11.87□□□□□ -0.51
CLCN6-201ENST00000312413 DXOO77932 396 aaKnown RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 RECKO95980 971 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 SNRPCP09234 159 aaKnown RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 C1orf100Q5SVJ3 147 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 FAM131CQ96AQ9 280 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 NUDT16L1Q9BRJ7 211 aaKnown RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 A0A1W2PPE3 182 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 AGFG2O95081 481 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 GLIPR1P48060 266 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 ZNF385AQ96PM9 386 aaKnown RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 PTPRZ1P23471 2315 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 LAMB1P07942 1786 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 WISP3O95389 354 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 COL10A1Q03692 680 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 QTRT1Q9BXR0 403 aaKnown RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 RBKSQ9H477 322 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 TCFL5Q9UL49 500 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 NPIPB9F8W1W9 429 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 DANCRP0C864 163 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 LIFP15018 202 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 C9orf40Q8IXQ3 194 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 CT55Q8WUE5 264 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 AQP3Q92482 292 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 MARS2Q96GW9 593 aaKnown RBP11.86□□□□□ -0.51
CLCN6-201ENST00000312413 DTX4Q9Y2E6 619 aa11.86□□□□□ -0.51
CLCN6-201ENST00000312413 PGPA6NDG6 321 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 PRDX2P32119 198 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
CLCN6-201ENST00000312413 ROM1Q03395 351 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 CEACAM21Q3KPI0 293 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 PARLQ9H300 379 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 USP54Q70EL1 1684 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 IGHV3OR15-7A0A075B7D8 119 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 EML2O95834 649 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 ID1P41134 155 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM78Q5T7P6 136 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 K7N7A8 449 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 SCTP09683 121 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 REG1BP48304 166 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 RPS11P62280 158 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLCN6-201ENST00000312413 MIC13Q5XKP0 118 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 FBXW9Q5XUX1 488 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 ZNF600Q6ZNG1 722 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 C1QCP02747 245 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
CLCN6-201ENST00000312413 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
CLCN6-201ENST00000312413 RTP5Q14D33 572 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 MS4A5Q9H3V2 200 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 NUDT3O95989 172 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 NPBWR2P48146 333 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
CLCN6-201ENST00000312413 TRBV9A0A0B4J1U6 114 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 MGST3O14880 152 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 ID4P47928 161 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 CALHM1Q8IU99 346 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM52Q8NDY8 209 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 OR10AG1Q8NH19 301 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 MAP1LC3AQ9H492 121 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-201ENST00000312413 MDP1Q86V88 176 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 PGLYRP4Q96LB8 373 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-201ENST00000312413 ISG15P05161 165 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 KCNMB1Q16558 191 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 PMCHL2Q9BQD1 86 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 SSTR5P35346 364 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 UNC119Q13432 240 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 FXYD3Q14802 87 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 ECSCRQ19T08 205 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 Q5BKY6 102 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 C9orf50Q5SZB4 431 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 ZNF645Q8N7E2 425 aa11.84□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A10PA6NDY2 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A18PA6NE21 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A16PA6NEW6 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A20PA6NIJ5 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A8PA6NJQ4 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A7PA6NKC0 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A22PA8MWA6 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A12PA8MX19 464 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms