RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ZNF883P0CG24 379 aa21.33■■□□□ 1
HOXB3-201ENST00000311626 SLC25A6P12236 298 aa21.33■■□□□ 1
HOXB3-201ENST00000311626 KHDC3LQ587J8 217 aa21.33■■□□□ 1
HOXB3-201ENST00000311626 FAM90A2PQ658T7 463 aa21.33■■□□□ 1
HOXB3-201ENST00000311626 OR2D2Q9H210 308 aa21.33■■□□□ 1
HOXB3-201ENST00000311626 SNIP1Q8TAD8 396 aaKnown RBP21.32■■□□□ 1
HOXB3-201ENST00000311626 LIN7CQ9NUP9 197 aaKnown RBP21.32■■□□□ 1
HOXB3-201ENST00000311626 CLN8Q9UBY8 286 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 IGHV3-43A0A0B4J1X8 118 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 SP9P0CG40 484 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 RD3LP0DJH9 198 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 IGHV3-43DP0DP04 118 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 Q6ZR03 302 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 PLPPR2Q96GM1 343 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 RBKSQ9H477 322 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 BOD1L1Q8NFC6 3051 aa21.32■■□□□ 1
HOXB3-201ENST00000311626 NPIPB11E5RHQ5 1161 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 PPIHO43447 177 aaKnown RBP21.31■■□□□ 1
HOXB3-201ENST00000311626 MDKP21741 143 aaPredicted RBP21.31■■□□□ 1
HOXB3-201ENST00000311626 MAS1LP35410 378 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 MDH2P40926 338 aaKnown RBP21.31■■□□□ 1
HOXB3-201ENST00000311626 EIF2S3P41091 472 aaKnown RBP21.31■■□□□ 1
HOXB3-201ENST00000311626 PRAMEF6Q5VXH4 476 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 CNEP1R1Q8N9A8 125 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 TCTEX1D2Q8WW35 142 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 METRNQ9UJH8 293 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 POLDIP2Q9Y2S7 368 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 CEBPZOSA8MTT3 80 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 LRRC75BQ2VPJ9 315 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 PDZD11Q5EBL8 140 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 RFESDQ8TAC1 157 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 SSX3Q99909 188 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 TMPRSS5Q9H3S3 457 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 SVILO95425 2214 aa21.31■■□□□ 1
HOXB3-201ENST00000311626 IFITM10A6NMD0 228 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 DEFB108AA8MXU0 73 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 C12orf77C9JDV5 145 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 IGKV1D-33P01593 117 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 IGKV1-33P01594 117 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 BCL2P10415 239 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 SPNS3Q6ZMD2 512 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 MRGPRDQ8TDS7 321 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 FER1L6-AS2Q96M78 137 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 TRIB1Q96RU8 372 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 MIOXQ9UGB7 285 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 LTC4SQ16873 150 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 ZNF251Q9BRH9 671 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 MBNL3Q9NUK0 354 aaKnown RBP21.3■■□□□ 1
HOXB3-201ENST00000311626 PCNX2A6NKB5 2137 aa21.3■■□□□ 1
HOXB3-201ENST00000311626 MLNRO43193 412 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 TRGC2P03986 189 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 GLIPR1P48060 266 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 SLC38A11Q08AI6 406 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 MOB1BQ7L9L4 216 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 KLF14Q8TD94 323 aaPredicted RBP21.29■■□□□ 1
HOXB3-201ENST00000311626 WDR61Q9GZS3 305 aaKnown RBP21.29■■□□□ 1
HOXB3-201ENST00000311626 ZNF146Q15072 292 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 DPPA3Q6W0C5 159 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 DCTN5Q9BTE1 182 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 DOK5Q9P104 306 aa21.29■■□□□ 1
HOXB3-201ENST00000311626 C17orf98A8MV24 154 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 S1PR2O95136 353 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 DEFA4P12838 97 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 IL2RGP31785 369 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 C4orf17Q53FE4 359 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 GFI1BQ5VTD9 330 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 ZDHHC16Q969W1 377 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 MSL2Q9HCI7 577 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 WIPI2Q9Y4P8 454 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 SOX8P57073 446 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 HBG1P69891 147 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 HBG2P69892 147 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 MRPL49Q13405 166 aaKnown RBP21.28■■□□□ 1
HOXB3-201ENST00000311626 CA5BP1Q8WTZ4 195 aa21.28■■□□□ 1
HOXB3-201ENST00000311626 TRBV23-1A0A0A0MS06 115 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 ALKBH2Q6NS38 261 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 CDPF1Q6NVV7 123 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 C1QL4Q86Z23 238 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 TRAV1-1A0A0B4J248 108 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 MAP1LC3B2A6NCE7 125 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 HBZP02008 142 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 GABRA2P47869 451 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 FABP6P51161 128 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 S100A12P80511 92 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 SLC35E3Q7Z769 313 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 Q8IYB0 196 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 GATAD1Q8WUU5 269 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 TAF15Q92804 592 aaKnown RBP eCLIP21.27■■□□□ 1
HOXB3-201ENST00000311626 MAP1LC3BQ9GZQ8 125 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 TREM2Q9NZC2 230 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 KCNIP1Q9NZI2 227 aa21.27■■□□□ 1
HOXB3-201ENST00000311626 A0A087WWC5 75 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 BRWD1-AS2P59051 145 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 TNFRSF9Q07011 255 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 C11orf53Q8IXP5 236 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 GALMQ96C23 342 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 CISD1Q9NZ45 108 aaKnown RBP21.26■□□□□ 0.99
HOXB3-201ENST00000311626 OR5H1A6NKK0 313 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 SSTR5P35346 364 aa21.26■□□□□ 0.99
HOXB3-201ENST00000311626 RPP25LQ8N5L8 163 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms