RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 HLA-DRB3P79483 266 aa15.27■□□□□ 0.04
LIME1-201ENST00000309546 RNF152Q8N8N0 203 aa15.27■□□□□ 0.04
LIME1-201ENST00000309546 PARP12Q9H0J9 701 aaKnown RBP15.27■□□□□ 0.04
LIME1-201ENST00000309546 ISYNA1Q9NPH2 558 aa15.27■□□□□ 0.04
LIME1-201ENST00000309546 G3V318 75 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 RAB29O14966 203 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 HLA-DRB1P01911 266 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 PSMB8P28062 276 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 VEGFCP49767 419 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 FABP5Q01469 135 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 KIR2DS1Q14954 304 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 C5orf64Q2M2E5 130 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 FAM71F2Q6NXP2 309 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 TMEM65Q6PI78 240 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 GLDNQ6ZMI3 551 aaPredicted RBP15.26■□□□□ 0.03
LIME1-201ENST00000309546 PRSS48Q7RTY5 328 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 OR5M8Q8NGP6 311 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 ABHD14BQ96IU4 210 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 MGLLQ99685 303 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 VCX3BQ9H321 246 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 OR51J1Q9H342 316 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 RIMS4Q9H426 269 aaPredicted RBP15.26■□□□□ 0.03
LIME1-201ENST00000309546 OR1A1Q9P1Q5 309 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 ZNF580Q9UK33 172 aa15.26■□□□□ 0.03
LIME1-201ENST00000309546 IGHV7-81A0A0B4J1V7 117 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 HSPA12AO43301 675 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 LUMP51884 338 aaPredicted RBP15.25■□□□□ 0.03
LIME1-201ENST00000309546 LIN54Q6MZP7 749 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 IZUMO2Q6UXV1 221 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 C4orf3Q8WVX3 66 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 ARHGAP5-AS1Q96IT6 56 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 CNBD2Q96M20 576 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 C12orf4Q9NQ89 552 aa15.25■□□□□ 0.03
LIME1-201ENST00000309546 TRBV6-6A0A0A6YYG2 114 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 TRAV41A0A0B4J266 112 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 DGCR2P98153 550 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 PLGLAQ15195 96 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 ECSCRQ19T08 205 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 HES5Q5TA89 166 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 FAM89BQ8N5H3 189 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 NPBQ8NG41 125 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 FAM3DQ96BQ1 224 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 CMSS1Q9BQ75 279 aaKnown RBP15.24■□□□□ 0.03
LIME1-201ENST00000309546 PECRQ9BY49 303 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 FBXL15Q9H469 300 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 HSF4Q9ULV5 492 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 V9GY05 133 aa15.24■□□□□ 0.03
LIME1-201ENST00000309546 OR5H14A6NHG9 310 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 FOXI3A8MTJ6 420 aaPredicted RBP15.23■□□□□ 0.03
LIME1-201ENST00000309546 H7C2Y5 167 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 NDUFA3O95167 84 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 GSTP1P09211 210 aaKnown RBP15.23■□□□□ 0.03
LIME1-201ENST00000309546 SCTP09683 121 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 CT45A6P0DMU7 189 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 CT45A5P0DMU8 189 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 CT45A7P0DMV0 189 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 ZBTB25P24278 435 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 CEACAM6P40199 344 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 OR11H1Q8NG94 326 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 OR56B1Q8NGI3 324 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 ABHD5Q8WTS1 349 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 EDARADDQ8WWZ3 215 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 OR5B12Q96R08 314 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 CHCHD6Q9BRQ6 235 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 C11orf54Q9H0W9 315 aaPredicted RBP15.23■□□□□ 0.03
LIME1-201ENST00000309546 KLK15Q9H2R5 256 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 Q9N2K0 584 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 ACOT13Q9NPJ3 140 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 MGAT4AQ9UM21 535 aa15.23■□□□□ 0.03
LIME1-201ENST00000309546 H0YJW9 148 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 PPIFP30405 207 aaKnown RBP15.22■□□□□ 0.03
LIME1-201ENST00000309546 HSPA13P48723 471 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 TMEM50BP56557 158 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 CD69Q07108 199 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 C2orf76Q3KRA6 126 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 C9orf66Q5T8R8 295 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 C11orf87Q6NUJ2 197 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 ZNF367Q7RTV3 350 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 GNB4Q9HAV0 340 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 ZMAT5Q9UDW3 170 aaKnown RBP15.22■□□□□ 0.03
LIME1-201ENST00000309546 BLOC1S6Q9UL45 172 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 RNF150Q9ULK6 438 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 WASHC3Q9Y3C0 194 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 A3GALT2U3KPV4 340 aa15.22■□□□□ 0.03
LIME1-201ENST00000309546 TMEM272A0A1B0GTI8 110 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 ERICH4A6NGS2 130 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 SEC14L6B5MCN3 397 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 ITGB1BP1O14713 200 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 RRHO14718 337 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 DENRO43583 198 aaKnown RBP15.21■□□□□ 0.03
LIME1-201ENST00000309546 NDPQ00604 133 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 PLA2G7Q13093 441 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 TBCEQ15813 527 aaPredicted RBP15.21■□□□□ 0.03
LIME1-201ENST00000309546 PLAC9Q5JTB6 97 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 DRAXINQ8NBI3 349 aaPredicted RBP15.21■□□□□ 0.03
LIME1-201ENST00000309546 MYOZ3Q8TDC0 251 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 UBE2E2Q96LR5 201 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 VSIG4Q9Y279 399 aa15.21■□□□□ 0.03
LIME1-201ENST00000309546 A0A1W2PN81 502 aa15.2■□□□□ 0.02
LIME1-201ENST00000309546 MC5RP33032 325 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms