RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 IGLV3-12A0A075B6K2 115 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 IGKV1-12A0A0C4DH73 117 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 SPAARA0A1B0GVQ0 90 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 LRRC3CA6NJW4 275 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 VAMP5O95183 116 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 IGKV1D-12P01611 117 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
RETREG3-201ENST00000309428 HIST1H2BLQ99880 126 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 GPR35Q9HC97 309 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 GNG12Q9UBI6 72 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 LILRA1O75019 489 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 MDH2P40926 338 aaKnown RBP10.85□□□□□ -0.67
RETREG3-201ENST00000309428 FUT6P51993 359 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 PRDX4Q13162 271 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 MSMO1Q15800 293 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 ZNF818PQ6ZRF7 136 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 DMRTC2Q8IXT2 367 aaPredicted RBP10.85□□□□□ -0.67
RETREG3-201ENST00000309428 ST6GALNAC3Q8NDV1 305 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 MTCH1Q9NZJ7 389 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 CLN8Q9UBY8 286 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 RNF24Q9Y225 148 aa10.85□□□□□ -0.67
RETREG3-201ENST00000309428 A8MXE2 369 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 F6UZH7 168 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 CYB5R3P00387 301 aaPredicted RBP10.84□□□□□ -0.67
RETREG3-201ENST00000309428 TAS2R60P59551 318 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 RSPO1Q2MKA7 263 aaPredicted RBP10.84□□□□□ -0.67
RETREG3-201ENST00000309428 ERASQ7Z444 233 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 HIST3H2BBQ8N257 126 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 ACTR3CQ9C0K3 210 aaPredicted RBP10.84□□□□□ -0.67
RETREG3-201ENST00000309428 ZNF552Q9H707 407 aaPredicted RBP10.84□□□□□ -0.67
RETREG3-201ENST00000309428 VAX2Q9UIW0 290 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 GOLT1BQ9Y3E0 138 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 CDS2O95674 445 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 CD55P08174 381 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 IL24Q13007 206 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 KIAA1644Q3SXP7 199 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 H2BFWTQ7Z2G1 175 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 GINS3Q9BRX5 216 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 NAT8Q9UHE5 227 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 IGHMP01871 453 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 COX5AP20674 150 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 CEACAM6P40199 344 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 TFPI2P48307 235 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 PCBD1P61457 104 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 EIF3IQ13347 325 aaKnown RBP10.84□□□□□ -0.67
RETREG3-201ENST00000309428 ICAM4Q14773 271 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 ATOH7Q8N100 152 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 SGMS2Q8NHU3 365 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 Q96M66 194 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 OR4C12Q96R67 309 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 ANGPTL4Q9BY76 406 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 WNT5BQ9H1J7 359 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 PCED1AQ9H1Q7 454 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 LIME1Q9H400 295 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 GLRX2Q9NS18 164 aa10.84□□□□□ -0.67
RETREG3-201ENST00000309428 HSPB1P04792 205 aaKnown RBP10.83□□□□□ -0.68
RETREG3-201ENST00000309428 FGF5P12034 268 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 HOXC12P31275 282 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 PRR27Q6MZM9 219 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 ZNF826PQ6ZT77 177 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 NUFIP2Q7Z417 695 aaKnown RBP10.83□□□□□ -0.68
RETREG3-201ENST00000309428 TMEM171Q8WVE6 324 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 PROK2Q9HC23 129 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 A0A1B0GUS0 222 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 FCN1O00602 326 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 IFI6P09912 130 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 FOLR2P14207 255 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 SRD5A2P31213 254 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
RETREG3-201ENST00000309428 RAB35Q15286 201 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 FAM53AQ6NSI3 398 aaPredicted RBP10.83□□□□□ -0.68
RETREG3-201ENST00000309428 CMTM2Q8TAZ6 248 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 SSMEM1Q8WWF3 244 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 TAAR9Q96RI9 348 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 CLCF1Q9UBD9 225 aa10.83□□□□□ -0.68
RETREG3-201ENST00000309428 LOC390937A0A1W2PQ73 354 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 IFNL4K9M1U5 179 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 PITX3O75364 302 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 RHBDL1O75783 438 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 PLA2G5P39877 138 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 AMTP48728 403 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 PNRC1Q12796 327 aaPredicted RBP10.82□□□□□ -0.68
RETREG3-201ENST00000309428 ZDHHC23Q8IYP9 409 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 TRIB1Q96RU8 372 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 K7N7A8 449 aa10.82□□□□□ -0.68
RETREG3-201ENST00000309428 TOX3O15405 576 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms