RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 UBAC2Q8NBM4 344 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 CLEC18CQ8NCF0 446 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 Q8TCH9 128 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 NARS2Q96I59 477 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 SAP30LQ9HAJ7 183 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 PLA2G2EQ9NZK7 142 aa18.69■□□□□ 0.58
PDLIM2-202ENST00000308354 VSTM5A8MXK1 200 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 ZNF16P17020 682 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 PPP1R35Q8TAP8 253 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 NINJ1Q92982 152 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 LURAP1Q96LR2 239 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 A0A0G2JRQ6 117 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 C15orf65H3BRN8 121 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 AKR1C2P52895 323 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 AKR1C1Q04828 323 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 STUMQ69YW2 141 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 DRAM1Q8N682 238 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 FAM216BQ8N7L0 139 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 DYNLRB1Q9NP97 96 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 KCNJ16Q9NPI9 418 aa18.68■□□□□ 0.58
PDLIM2-202ENST00000308354 LRBAP50851 2863 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 MED6O75586 246 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 EPHA1P21709 976 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 OMGP23515 440 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 CAV2P51636 162 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 PXDC1Q5TGL8 231 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 FGFRL1Q8N441 504 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 OR2C3Q8N628 320 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 CCL17Q92583 94 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 SMIM8Q96KF7 97 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 DIRC2Q96SL1 478 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 OR2D2Q9H210 308 aa18.67■□□□□ 0.58
PDLIM2-202ENST00000308354 RAB19A4D1S5 217 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 FAM24AA6NFZ4 105 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 CD55P08174 381 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 ADH4P08319 380 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 LPAR6P43657 344 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 EWSR1Q01844 656 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 ZNF808Q8N4W9 903 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 AKR1E2Q96JD6 320 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 CISD1Q9NZ45 108 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 RAI1Q7Z5J4 1906 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 IGHV3-7P01780 117 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 APOC3P02656 99 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 SULT1A2P50226 295 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 PAX5Q02548 391 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 GAFA1Q96PS6 74 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 HRH4Q9H3N8 390 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 ACACBO00763 2458 aa18.66■□□□□ 0.58
PDLIM2-202ENST00000308354 ABCA4P78363 2273 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 IGSF23A1L1A6 192 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 SPINT2O43291 252 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 IGKV1-39P01597 117 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 IGKV1D-39P04432 117 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 PVALBP20472 110 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 APOBEC3AP31941 199 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 ID3Q02535 119 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 IZUMO4Q1ZYL8 232 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 ZNF561Q8N587 486 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 SAT2Q96F10 170 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 C5orf30Q96GV9 206 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 ARV1Q9H2C2 271 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 SEBOXQ9HB31 216 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 RNF115Q9Y4L5 304 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 HIVEP3Q5T1R4 2406 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 WNT2P09544 360 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 SRSF3P84103 164 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 UQCC3Q6UW78 93 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 GPR146Q96CH1 333 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 SDSLQ96GA7 329 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 EGLN1Q9GZT9 426 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 MMP26Q9NRE1 261 aa18.65■□□□□ 0.58
PDLIM2-202ENST00000308354 BORCS7-ASMTA0A0B4J1R7 106 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 TMEM50AO95807 157 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 UQCRFS1P47985 274 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 ABHD14BQ96IU4 210 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 LYRM2Q9NU23 88 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 LRRC30A6NM36 301 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 M6PRP20645 277 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 ARHGDIBP52566 201 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 BTNL3Q6UXE8 466 aa18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 RNASE11Q8TAA1 199 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-202ENST00000308354 SPTBN1Q01082 2364 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 TMPRSS2O15393 492 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 ST8SIA5O15466 376 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 GZMHP20718 246 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 VAMP2P63027 116 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 ZNF788Q6ZQV5 615 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 ZNF645Q8N7E2 425 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 ZNF665Q9H7R5 613 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 LIN7CQ9NUP9 197 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 ARFGEF3Q5TH69 2177 aa18.63■□□□□ 0.57
PDLIM2-202ENST00000308354 B8ZZF3 427 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 MUC1P15941 1255 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 ZNF585BQ52M93 769 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 OR2B11Q5JQS5 317 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 UTF1Q5T230 341 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 TEX36Q5VZQ5 186 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 Q6ZRM9 215 aa18.62■□□□□ 0.57
PDLIM2-202ENST00000308354 GINS3Q9BRX5 216 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms