RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RCC1LQ96I51 464 aaKnown RBP12.43□□□□□ -0.42
PTPN9-201ENST00000306726 H0Y8G0 127 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 TCAPO15273 167 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 ECI1P42126 302 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 HBG1P69891 147 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 HBG2P69892 147 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 C10orf91Q5T1B1 145 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 FAM27BQ5VT28 67 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 A0A0U1RQV5 110 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 CBR3O75828 277 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 CYB561P49447 251 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 IL15RAQ13261 267 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 TMEM241Q24JQ0 296 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 KIAA1644Q3SXP7 199 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 PINX1Q96BK5 328 aaKnown RBP12.43□□□□□ -0.42
PTPN9-201ENST00000306726 C14orf144Q96I85 54 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 DCTN5Q9BTE1 182 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
PTPN9-201ENST00000306726 LYZL6O75951 148 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 VAMP5O95183 116 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 RAC2P15153 192 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 NTF3P20783 257 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 AESQ08117 197 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 C6orf15Q6UXA7 325 aaPredicted RBP12.42□□□□□ -0.42
PTPN9-201ENST00000306726 SSX7Q7RTT5 188 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 SELENOKQ9Y6D0 94 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 ZFHX4Q86UP3 3567 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 A6NNC1 897 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 BCL2P10415 239 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 SLC25A6P12236 298 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 RAC1P63000 192 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 OR10A7Q8NGE5 316 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 MRPL30Q8TCC3 161 aaKnown RBP12.42□□□□□ -0.42
PTPN9-201ENST00000306726 NABP1Q96AH0 204 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 OR51I2Q9H344 312 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
PTPN9-201ENST00000306726 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
PTPN9-201ENST00000306726 DFFBO76075 338 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 ZNF25P17030 456 aaPredicted RBP12.42□□□□□ -0.42
PTPN9-201ENST00000306726 F2RP25116 425 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 MAGEA5P43359 124 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 TAS2R30P59541 319 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 ABHD17BQ5VST6 288 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 ERASQ7Z444 233 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 CLDND2Q8NHS1 167 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 LEAP2Q969E1 77 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 DMRT1Q9Y5R6 373 aa12.42□□□□□ -0.42
PTPN9-201ENST00000306726 KIR2DS1A0A191URI9 304 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 SPAARA0A1B0GVQ0 90 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 OR6C6A6NF89 314 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 C21orf140B9A014 251 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 MDH2P40926 338 aaKnown RBP12.41□□□□□ -0.42
PTPN9-201ENST00000306726 KIR2DS4P43632 304 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 KIR2DS1Q14954 304 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 OR52L2PQ8NGH6 319 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 C18orf12Q96KH6 178 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 GNG12Q9UBI6 72 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 COL27A1Q8IZC6 1860 aaPredicted RBP12.41□□□□□ -0.42
PTPN9-201ENST00000306726 OTOGLQ3ZCN5 2332 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 WNT9BO14905 357 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 GLIPR1P48060 266 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 BAGE3Q86Y29 109 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 BAGE2Q86Y30 109 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 FAM58AQ8N1B3 248 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 OR4X1Q8NH49 305 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 IGHV2-5P01817 119 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 KRTDAPP60985 99 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 PCBD1P61457 104 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 HIST1H2BLQ99880 126 aa12.41□□□□□ -0.42
PTPN9-201ENST00000306726 IGHV3-48P01763 117 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 HERPUD1Q15011 391 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 PDLIM3Q53GG5 364 aaPredicted RBP12.4□□□□□ -0.42
PTPN9-201ENST00000306726 PSG11Q9UQ72 335 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 CREBBPQ92793 2442 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 FAM157AC9JC47 383 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 RAMP3O60896 148 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 PITX3O75364 302 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 PTBP3O95758 552 aaKnown RBP12.4□□□□□ -0.42
PTPN9-201ENST00000306726 TFF3Q07654 80 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 Q3ZCU0 254 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 KCNIP1Q9NZI2 227 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 ATMQ13315 3056 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 SYNGR3O43761 229 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 ZG16O60844 167 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 AGFG2O95081 481 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 NDUFB4O95168 129 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 DTYMKP23919 212 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 RAC3P60763 192 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 SRPXP78539 464 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 HIST3H2BBQ8N257 126 aa12.4□□□□□ -0.42
PTPN9-201ENST00000306726 TM2D1Q9BX74 207 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms