RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 WDR31Q8NA23 367 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 NPVFQ9HCQ7 196 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 C17orf51A8MQB3 221 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
USP42-201ENST00000306177 TMEM54Q969K7 222 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 WNT5BQ9H1J7 359 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 OR5AC2Q9NZP5 309 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 ALPK2Q86TB3 2170 aa13.74□□□□□ -0.21
USP42-201ENST00000306177 OTOFQ9HC10 1997 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 CBY3A6NI87 242 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 MC5RP33032 325 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 RPL30P62888 115 aaKnown RBP13.73□□□□□ -0.21
USP42-201ENST00000306177 NSUN5P2Q63ZY6 315 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 TMEM252Q8N6L7 170 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 DLL3Q9NYJ7 618 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 CCKARP32238 428 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 ECSCRQ19T08 205 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 APCDD1LQ8NCL9 501 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 FAM222BQ8WU58 562 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 SRD5A3Q9H8P0 318 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 LYRM2Q9NU23 88 aaPredicted RBP13.73□□□□□ -0.21
USP42-201ENST00000306177 CNOT1A5YKK6 2376 aaKnown RBP13.73□□□□□ -0.21
USP42-201ENST00000306177 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 ATP1A1-AS1Q5TC04 95 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 LPAR2Q9HBW0 351 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 FOXJ2Q9P0K8 574 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 ZNF236Q9UL36 1845 aa13.73□□□□□ -0.21
USP42-201ENST00000306177 ICE1Q9Y2F5 2266 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 FAM74A7A6NL05 159 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 P2RY4P51582 365 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 RIGQ13278 110 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 Q96M66 194 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 RSRP1Q9BUV0 290 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 KLF4O43474 513 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 ZNF253O75346 499 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 Q1RN00 199 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 KLF14Q8TD94 323 aaPredicted RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 LOC101059948A0A1B0GTJ6 334 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 KCNAB3O43448 404 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 RPL27AP46776 148 aaKnown RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 SHISA5Q8N114 240 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 RGP1Q92546 391 aaPredicted RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 TRAF4Q9BUZ4 470 aaPredicted RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 AICDAQ9GZX7 198 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 NPDC1Q9NQX5 325 aaPredicted RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 CISD1Q9NZ45 108 aaKnown RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 PGLYRP1O75594 196 aaPredicted RBP13.72□□□□□ -0.21
USP42-201ENST00000306177 THY1P04216 161 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 FAM87AP0C7U9 286 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 SULT1A2P50226 295 aa13.72□□□□□ -0.21
USP42-201ENST00000306177 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 UBE2V2Q15819 145 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 IL22RA2Q969J5 263 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 HIGD1AQ9Y241 93 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 SCN2AQ99250 2005 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 NDUFA2O43678 99 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 SNCGO76070 127 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 ORM1P02763 201 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 RUNX1Q01196 453 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 OR1L6Q8NGR2 347 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 OR10C1Q96KK4 312 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 LOC390937A0A1W2PQ73 354 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 ODAMA1E959 279 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 MPDU1O75352 247 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 HOXA6P31267 233 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 RPL13AP40429 203 aaKnown RBP13.71□□□□□ -0.21
USP42-201ENST00000306177 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 SFXN3Q9BWM7 321 aa13.71□□□□□ -0.21
USP42-201ENST00000306177 ZNF883P0CG24 379 aa13.71□□□□□ -0.22
USP42-201ENST00000306177 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 EP300Q09472 2414 aaPredicted RBP13.7□□□□□ -0.22
USP42-201ENST00000306177 M0R2Z0 102 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 EFEMP2O95967 443 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 HIST1H1EP10412 219 aaKnown RBP13.7□□□□□ -0.22
USP42-201ENST00000306177 BCL2P10415 239 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 WNT5AP41221 380 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 IL19Q9UHD0 177 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 CHCHD2Q9Y6H1 151 aaPredicted RBP13.7□□□□□ -0.22
USP42-201ENST00000306177 IGHV3-21A0A0B4J1V1 117 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 CEBPDP49716 269 aaPredicted RBP13.7□□□□□ -0.22
USP42-201ENST00000306177 TMEM97Q5BJF2 176 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 PAXXQ9BUH6 204 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 SLC2A8Q9NY64 477 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 WASHC3Q9Y3C0 194 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 TGFBR3LH3BV60 316 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 J3QW42 95 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 HYPMO75409 117 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 C19orf57Q0VDD7 668 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 C16orf82Q7Z2V1 217 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 STARD4Q96DR4 205 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 RHOVQ96L33 236 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 CALYQ9NYX4 217 aa13.7□□□□□ -0.22
USP42-201ENST00000306177 PXMP4Q9Y6I8 212 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms