RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CT45A6P0DMU7 189 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CT45A5P0DMU8 189 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CT45A7P0DMV0 189 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CT45A1Q5HYN5 189 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 SLC23A3Q6PIS1 610 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CT45A3Q8NHU0 189 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CA5BP1Q8WTZ4 195 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 ZNF524Q96C55 264 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 PLXNB3Q9ULL4 1909 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 hCG_38984A0A1B0GV85 526 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 WISP1O95388 367 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 RFPL3SP0C7P2 107 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 FGF5P12034 268 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 DDTP30046 118 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 AMTP48728 403 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 ZNF83P51522 516 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CFHR1Q03591 330 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 DMWDQ09019 674 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
DDX54-201ENST00000306014 DNASE2BQ8WZ79 361 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CLDN16Q9Y5I7 305 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 CCL1P22362 96 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 ZNF506Q5JVG8 444 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 HSD17B10Q99714 261 aaKnown RBP11.39□□□□□ -0.59
DDX54-201ENST00000306014 WFDC1Q9HC57 220 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 DOCK7Q96N67 2140 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 DENND4CQ5VZ89 1909 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 COX7A2P2O60397 106 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 ZIC3O60481 467 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 AGFG2O95081 481 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 NDUFB4O95168 129 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 RANP62826 216 aaKnown RBP11.39□□□□□ -0.59
DDX54-201ENST00000306014 CCL20P78556 96 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 FBXW9Q5XUX1 488 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 OR4P4Q8NGL7 312 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 GUCD1Q96NT3 240 aa11.39□□□□□ -0.59
DDX54-201ENST00000306014 ZNF552Q9H707 407 aaPredicted RBP11.39□□□□□ -0.59
DDX54-201ENST00000306014 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 HRASP01112 189 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
DDX54-201ENST00000306014 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
DDX54-201ENST00000306014 GAMTQ14353 236 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 TMEM183BQ1AE95 376 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
DDX54-201ENST00000306014 CXXC4Q9H2H0 198 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 QRFPP83859 136 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 SAP25Q8TEE9 199 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 RCC1LQ96I51 464 aaKnown RBP11.38□□□□□ -0.59
DDX54-201ENST00000306014 PRDM14Q9GZV8 571 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 SH2D2AQ9NP31 389 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 CISD1Q9NZ45 108 aaKnown RBP11.38□□□□□ -0.59
DDX54-201ENST00000306014 IL36RNQ9UBH0 155 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 CD81P60033 236 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 SRSF4Q08170 494 aaKnown RBP11.38□□□□□ -0.59
DDX54-201ENST00000306014 SLC25A53Q5H9E4 307 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 ZADH2Q8N4Q0 377 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 Q8WTZ3 238 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 TUBA4BQ9H853 241 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 SLC45A2Q9UMX9 530 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 APC2O95996 2303 aa11.38□□□□□ -0.59
DDX54-201ENST00000306014 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 CSRP2Q16527 193 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 OR1L1Q8NH94 360 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 PDE6DO43924 150 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 DEFA4P12838 97 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 UCP1P25874 307 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 CD1BP29016 333 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
DDX54-201ENST00000306014 GNB1P62873 340 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 ZBTB34Q8NCN2 500 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 P2RX4Q99571 388 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 TREM2Q9NZC2 230 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 ARL3P36405 182 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 PSG5Q15238 335 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 HES7Q9BYE0 225 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 PAM16Q9Y3D7 125 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 CHEK1O14757 476 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 SCGB2A1O75556 95 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 HBZP02008 142 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
DDX54-201ENST00000306014 FRMPD3Q5JV73 1810 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 ZNF253O75346 499 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 IER3P46695 156 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 BPIFB3P59826 476 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 DCAF10Q5QP82 559 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 TMEM251Q8N6I4 163 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 KLHDC1Q8N7A1 406 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 PROB1E7EW31 1015 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 EGR1P18146 543 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 CDCP2Q5VXM1 449 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 FADS6Q8N9I5 356 aa11.36□□□□□ -0.59
DDX54-201ENST00000306014 OR4S2Q8NH73 311 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms