RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 RBMXL3Q8N7X1 1067 aaKnown RBP11.38□□□□□ -0.59
CASC4-201ENST00000299957 M1APQ8TC57 530 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 FAM131CQ96AQ9 280 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 SYNGR3O43761 229 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 PITX3O75364 302 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 CEACAM21Q3KPI0 293 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 CTDSP1Q9GZU7 261 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 GLRX2Q9NS18 164 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 PAM16Q9Y3D7 125 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 VPS13AQ96RL7 3174 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 CELSR3Q9NYQ7 3312 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 IGHV3-21A0A0B4J1V1 117 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 HLA-GP17693 338 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 SSTR5P35346 364 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 REG1BP48304 166 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 SGK494Q96LW2 274 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 CEP295Q9C0D2 2601 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 RNF224P0DH78 156 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 DCAF10Q5QP82 559 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 WFDC8Q8IUA0 241 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 OR5A2Q8NGI9 324 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 DEPPQ9NTK1 212 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 FCN1O00602 326 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 CAMPP49913 170 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 MST1LQ2TV78 715 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 MRPL54Q6P161 138 aaKnown RBP11.37□□□□□ -0.59
CASC4-201ENST00000299957 ZIC4Q8N9L1 334 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 NEIL1Q96FI4 390 aaPredicted RBP11.37□□□□□ -0.59
CASC4-201ENST00000299957 PCED1AQ9H1Q7 454 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
CASC4-201ENST00000299957 hCG_38984A0A1B0GV85 526 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 LINC01387J3KSC0 135 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 CELA3BP08861 270 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 LHFPL1Q86WI0 220 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 DNASE2BQ8WZ79 361 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 RCC1LQ96I51 464 aaKnown RBP11.36□□□□□ -0.59
CASC4-201ENST00000299957 TAAR9Q96RI9 348 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
CASC4-201ENST00000299957 FRMPD3Q5JV73 1810 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 OR51G1Q8NGK1 321 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 BARX1Q9HBU1 254 aaPredicted RBP11.36□□□□□ -0.59
CASC4-201ENST00000299957 PINLYPA6NC86 204 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 LRRC3CA6NJW4 275 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 OR5B21A6NL26 309 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 J3QT63 122 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 RAB4AP20338 218 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 GLIPR1P48060 266 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 C21orf62-AS1Q17RA5 79 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 OR4P4Q8NGL7 312 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 TMEM171Q8WVE6 324 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 C10orf35Q96D05 121 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 PNRC2Q9NPJ4 139 aaKnown RBP11.36□□□□□ -0.59
CASC4-201ENST00000299957 ZDHHC8Q9ULC8 765 aa11.36□□□□□ -0.59
CASC4-201ENST00000299957 LILRA1O75019 489 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 S1PR2O95136 353 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 OR10J4P0C629 311 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 TIGITQ495A1 244 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 KHDC3LQ587J8 217 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 FAM201AQ5SY85 155 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 GATAD1Q8WUU5 269 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 MSI2Q96DH6 328 aaKnown RBP11.35□□□□□ -0.59
CASC4-201ENST00000299957 OR51M1Q9H341 326 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 RNF122Q9H9V4 155 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 NAT8Q9UHE5 227 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 NDUFS6O75380 124 aaKnown RBP11.35□□□□□ -0.59
CASC4-201ENST00000299957 PLAUP00749 431 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 GYPAP02724 150 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 CXCL1P09341 107 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 MEF2BQ02080 365 aaPredicted RBP11.35□□□□□ -0.59
CASC4-201ENST00000299957 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 FAM89BQ8N5H3 189 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 ATG101Q9BSB4 218 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 PARD6AQ9NPB6 346 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 TUBD1Q9UJT1 453 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 HBZP02008 142 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 PMS2CLQ68D20 193 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 SLC35E3Q7Z769 313 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 C1orf210Q8IVY1 113 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 TAF15Q92804 592 aaKnown RBP eCLIP11.35□□□□□ -0.59
CASC4-201ENST00000299957 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 MPC1Q9Y5U8 109 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 TNCP24821 2201 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 A0A1W2PRD5 423 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 A0A1W2PRF3 423 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 A0A1W2PRM7 423 aa11.35□□□□□ -0.59
CASC4-201ENST00000299957 SRSF10O75494 262 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms