RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 HYPMO75409 117 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MFAP2P55001 183 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR52M1Q8NGK5 317 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TRBV5-3A0A0A0MS03 114 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CA2P00918 260 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PGA4P0DJD7 388 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PGA5P0DJD9 388 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CD82P27701 267 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CEACAM21Q3KPI0 293 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 LYRM7Q5U5X0 104 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MIC13Q5XKP0 118 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KLK15Q9H2R5 256 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TNFSF18Q9UNG2 199 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PCM1Q15154 2024 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KLF7O75840 302 aaPredicted RBP11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ASAH2BP0C7U1 165 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 NAT1P18440 290 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 FCGR2BP31994 310 aaPredicted RBP11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CDCP2Q5VXM1 449 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SGMS2Q8NHU3 365 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGHV3-66A0A0C4DH42 116 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF645Q8N7E2 425 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR4B1Q8NGF8 309 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TAS2R60P59551 318 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 METTL26Q96S19 204 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TGIF2-C20orf24A0A0A6YYL0 155 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 LOC101059948A0A1B0GTJ6 334 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HPRT1P00492 218 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HINT1P49773 126 aaPredicted RBP11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RRN3P1Q2M238 152 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 LINC00596Q86U02 117 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SRXN1Q9BYN0 137 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 S4R3C0 116 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TMEM229AB2RXF0 380 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C4orf51C9J302 202 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PRSS8Q16651 343 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 STXBP6Q8NFX7 210 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RHOVQ96L33 236 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 FTH1P19P0C7X4 201 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 LRRC75BQ2VPJ9 315 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 STPG1Q5TH74 334 aa11.72□□□□□ -0.53
CHRFAM7A-201ENST00000299847 NGFRP08138 427 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 LINC00869P0C866 280 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZDHHC8Q9ULC8 765 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 FUT5Q11128 374 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PQLC2Q6ZP29 291 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR10J6PQ8NGY7 276 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CISD1Q9NZ45 108 aaKnown RBP11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNFX1Q9P2E3 1918 aaKnown RBP11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 B4DEV8 164 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR4A5Q8NH83 315 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SPAG17Q6Q759 2223 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RPL27AP46776 148 aaKnown RBP11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IFITM3Q01628 133 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 UNQ5815/PRO19632Q6UWF5 114 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TRGC2P03986 189 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MAS1LP35410 378 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MMP16P51512 607 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ERVFRD-1P60508 538 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 UBE2V2Q15819 145 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 WDR54Q9H977 334 aa11.71□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MYO16Q9Y6X6 1858 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PGPA6NDG6 321 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SPATA45Q537H7 98 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CLEC2AQ6UVW9 174 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 A6NDN8 102 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SLC25A17O43808 307 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 COX6B1P14854 86 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 HERPUD1Q15011 391 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ADIPOQQ15848 244 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 C19orf54Q5BKX5 351 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 OR4A47Q6IF82 309 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NFAM1Q8NET5 270 aaPredicted RBP11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IGHV3OR16-13A0A075B7E8 117 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IGHV3-74A0A0B4J1X5 117 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 EPOPA6NHQ4 379 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 KBTBD11O94819 623 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 HOXA6P31267 233 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FAM181BA6NEQ2 426 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FGF12P61328 243 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ATOH7Q8N100 152 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
CHRFAM7A-201ENST00000299847 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms