RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 ABHD14AQ9BUJ0 271 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 MRPL20Q9BYC9 149 aaKnown RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 C11orf54Q9H0W9 315 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 TMEM133Q9H2Q1 129 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 GAL3ST2Q9H3Q3 398 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 OR2S2Q9NQN1 319 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 TNFRSF19Q9NS68 423 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 TAS2R3Q9NYW6 316 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 LPAR3Q9UBY5 353 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 RBMX2Q9Y388 322 aaKnown RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 KPTNQ9Y664 436 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ABCA1O95477 2261 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 TRBV6-7A0A0A0MS04 114 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 IGHV1-69DA0A0B4J2H0 117 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ANKRD20A5PA0PJZ0 165 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR5H14A6NHG9 310 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 A8MV72 311 aaPredicted RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF736B4DX44 427 aaPredicted RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 HSD17B6O14756 317 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 NPFFO15130 113 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CTDSPLO15194 276 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 PLA2G10O15496 165 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 HSPA12AO43301 675 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 TNFSF12O43508 249 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 RAB3DO95716 219 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 IGHV1-69P01742 117 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 AMY2AP04746 511 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR8U9P0C7N5 309 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR5H8P0DN80 308 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 PRTN3P24158 256 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CD24P25063 80 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 PTBP1P26599 531 aaKnown RBP eCLIP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 FCGR2CP31995 323 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 BTCP35070 178 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 SAA4P35542 130 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CEACAM6P40199 344 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 KIR2DS4P43632 304 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CBX5P45973 191 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CCR6P51684 374 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF45Q02386 682 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 KIR2DS1Q14954 304 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 FAM189A2Q15884 450 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 HLA-DRB5Q30154 266 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 SCGB2B2Q4G0G5 96 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 RNASE10Q5GAN6 216 aaKnown RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CT45A1Q5HYN5 189 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR2B11Q5JQS5 317 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 STEAP3Q658P3 488 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ODF3L1Q8IXM7 274 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 LYG1Q8N1E2 194 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ABHD12Q8N2K0 398 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR4A4PQ8NGN8 299 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR8U1Q8NH10 309 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CT45A3Q8NHU0 189 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 SECTM1Q8WVN6 248 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 DUX5Q96PT3 197 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF2Q9BSG1 426 aaPredicted RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CLEC7AQ9BXN2 247 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 WDR12Q9GZL7 423 aaKnown RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 OR2D2Q9H210 308 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 RIMS4Q9H426 269 aaPredicted RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 METTL8Q9H825 291 aaKnown RBP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 HRASLSQ9HDD0 168 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CCL28Q9NRJ3 127 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 MCUBQ9NWR8 336 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 PRR13Q9NZ81 148 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 JPT1Q9UK76 154 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 HILPDAQ9Y5L2 63 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 CSPG4Q6UVK1 2322 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 ACANP16112 2415 aa5.25□□□□□ -1.57
DEPDC4-201ENST00000299185 WNK2Q9Y3S1 2297 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 SAA2-SAA4A0A096LPE2 208 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 SH2D7A6NKC9 451 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 J3QR06 171 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 M0R1X1 148 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 SULT1C2O00338 296 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 UPK1BO75841 260 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 RBBP9O75884 186 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 TUSC2O75896 110 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 TPPPO94811 219 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 PPYP01298 95 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 CD74P04233 296 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 SAA2P0DJI9 122 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 PGAM2P15259 253 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 SRP14P37108 136 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 TAS2R46P59540 309 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 TAS2R19P59542 299 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 ACTBP60709 375 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 HERV-K104P61576 105 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 ACTG1P63261 375 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 PITPNAQ00169 270 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 ARL6IP1Q15041 203 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 DEFB112Q30KQ8 113 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 MORN2Q502X0 79 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 PHLDA2Q53GA4 152 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF626Q68DY1 528 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF660Q6AZW8 331 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 STEAP1BQ6NZ63 245 aa5.24□□□□□ -1.57
DEPDC4-201ENST00000299185 TRAT1Q6PIZ9 186 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms