RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 B9D1Q9UPM9 204 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 PHLPP1O60346 1717 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 F8W1H4 67 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 PLP2Q04941 152 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 C20orf196Q8IYI0 205 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 TTC9CQ8N5M4 171 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 SARAFQ96BY9 339 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 ROBO1Q9Y6N7 1651 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 HSPB6O14558 160 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 FCN3O75636 299 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 RAE1P78406 368 aaKnown RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 SSBP2P81877 361 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 EAF1Q96JC9 268 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 FGF21Q9NSA1 209 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF732B4DXR9 585 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 HOXB9P17482 250 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 LGALS7P47929 136 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 SPINT3P49223 89 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF137PP52743 207 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 OR52N5Q8NH56 324 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 NEUROG1Q92886 237 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 CDX2Q99626 313 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 COA3Q9Y2R0 106 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 MRPS18BQ9Y676 258 aaKnown RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 SRFP11831 508 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 C3AR1Q16581 482 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 SPAG8Q99932 426 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 HDHD3Q9BSH5 251 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-201ENST00000296215 GGTLC1Q9BX51 225 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 MYO9BQ13459 2157 aa10.17□□□□□ -0.78
SNIP1-201ENST00000296215 IFNL4K9M1U5 179 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 HS3ST1O14792 307 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 NDUFB8O95169 186 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 GLRXP35754 106 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 ZXDCQ2QGD7 858 aaPredicted RBP10.16□□□□□ -0.78
SNIP1-201ENST00000296215 C1QL3Q5VWW1 255 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 SIGLEC12Q96PQ1 595 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 SDF2Q99470 211 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 DEFB129Q9H1M3 183 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 TRAV8-6A0A0B4J262 113 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 TMEM8BA6NDV4 472 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 FXYD3Q14802 87 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 CXorf66Q5JRM2 361 aaPredicted RBP10.16□□□□□ -0.78
SNIP1-201ENST00000296215 IBA57Q5T440 356 aaKnown RBP10.16□□□□□ -0.78
SNIP1-201ENST00000296215 SLC35E4Q6ICL7 350 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 DCAF4L2Q8NA75 395 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 NPFFR1Q9GZQ6 430 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 A8MWV9 139 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 VSIG8P0DPA2 414 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 KLRB1Q12918 225 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 H2BFWTQ7Z2G1 175 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 KLHDC7BQ96G42 594 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 PHF7Q9BWX1 381 aaPredicted RBP10.16□□□□□ -0.78
SNIP1-201ENST00000296215 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 FAM181BA6NEQ2 426 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 NPPBP16860 134 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
SNIP1-201ENST00000296215 PRTN3P24158 256 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 KIR2DL2P43627 348 aaPredicted RBP10.16□□□□□ -0.78
SNIP1-201ENST00000296215 PSG5Q15238 335 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 ANKRD33Q7Z3H0 272 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 DUSP23Q9BVJ7 150 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 ENTPD2Q9Y5L3 495 aa10.16□□□□□ -0.78
SNIP1-201ENST00000296215 A0A0G2JLL6 359 aaPredicted RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 NRG2O14511 850 aaPredicted RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 IGLL1P15814 213 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 FOXL1Q12952 345 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 ADIPOQQ15848 244 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 DMRTC1Q5HYR2 192 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 PRRT2Q7Z6L0 340 aaPredicted RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 STPG3Q8N7X2 389 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 SOCS4Q8WXH5 440 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 SPTSSAQ969W0 71 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 NUP205Q92621 2012 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 OOEPA6NGQ2 149 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 C1orf105O95561 183 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 OR9G4Q8NGQ1 327 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 WFDC1Q9HC57 220 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 WISP3O95389 354 aaPredicted RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 C1QTNF9P0C862 333 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 SUMO3P55854 103 aaPredicted RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 RHOBP62745 196 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 DOK3Q7L591 496 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF595Q8IYB9 648 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 PSG8Q9UQ74 426 aa10.15□□□□□ -0.78
SNIP1-201ENST00000296215 PTRH2Q9Y3E5 179 aaKnown RBP10.15□□□□□ -0.78
SNIP1-201ENST00000296215 A0A1W2PPM0 123 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 IGSF23A1L1A6 192 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 NCBP2LA6PVI3 153 aaKnown RBP10.14□□□□□ -0.79
SNIP1-201ENST00000296215 M0QXV9 152 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 CEACAM5P06731 702 aa10.14□□□□□ -0.79
SNIP1-201ENST00000296215 CRYBB3P26998 211 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms