RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 IFNA5P01569 189 aa20.03■□□□□ 0.8
TRIM54-201ENST00000296098 CFHR2P36980 270 aa20.03■□□□□ 0.8
TRIM54-201ENST00000296098 OR2B11Q5JQS5 317 aa20.03■□□□□ 0.8
TRIM54-201ENST00000296098 IGKV1D-17A0A075B6S4 117 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 FAM90A26D6RGX4 464 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 TAS2R30P59541 319 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 TCTEX1D2Q8WW35 142 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 MEGF10Q96KG7 1140 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 ABHD14AQ9BUJ0 271 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 KCNJ16Q9NPI9 418 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 NDRG3Q9UGV2 375 aa20.02■□□□□ 0.8
TRIM54-201ENST00000296098 IGHV3-43A0A0B4J1X8 118 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 MKRN2OSH3BPM6 223 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 C15orf65H3BRN8 121 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 IGHV3-43DP0DP04 118 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 AKR1C8PQ5T2L2 129 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 SLC25A24Q6NUK1 477 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 VHLLQ6RSH7 139 aa20.02■□□□□ 0.79
TRIM54-201ENST00000296098 A0A1B0GW64 132 aa20.01■□□□□ 0.79
TRIM54-201ENST00000296098 H2AFB1P0C5Y9 115 aa20.01■□□□□ 0.79
TRIM54-201ENST00000296098 ZNF816Q0VGE8 651 aaPredicted RBP20.01■□□□□ 0.79
TRIM54-201ENST00000296098 BTNL3Q6UXE8 466 aa20.01■□□□□ 0.79
TRIM54-201ENST00000296098 GCSAMQ8N6F7 178 aa20.01■□□□□ 0.79
TRIM54-201ENST00000296098 RFESDQ8TAC1 157 aa20.01■□□□□ 0.79
TRIM54-201ENST00000296098 DCTN5Q9BTE1 182 aa20.01■□□□□ 0.79
TRIM54-201ENST00000296098 ATP6V1G2-DDX39BF2Z307 99 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 GPR37O15354 613 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 ADH4P08319 380 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 METTL15P1P0C7V9 234 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 NFYBP25208 207 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 RPS23P62266 143 aaKnown RBP20■□□□□ 0.79
TRIM54-201ENST00000296098 HTD2P86397 168 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 MOGAT3Q86VF5 341 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 PPP1R35Q8TAP8 253 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 SEBOXQ9HB31 216 aaPredicted RBP20■□□□□ 0.79
TRIM54-201ENST00000296098 FBXO7Q9Y3I1 522 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 IGLV3-9A0A075B6K5 115 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 MEX3AA1L020 520 aaKnown RBP20■□□□□ 0.79
TRIM54-201ENST00000296098 BTBD17A6NE02 478 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 S1PR2O95136 353 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 P0C879 139 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 G6PCP35575 357 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 HFEQ30201 348 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 TCTEX1D1Q8N7M0 179 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 SNX22Q96L94 193 aa20■□□□□ 0.79
TRIM54-201ENST00000296098 IGHV3OR15-7A0A075B7D8 119 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 ODAMA1E959 279 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 SPRY3O43610 288 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 CLDN1O95832 211 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 KRASP01116 189 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 UBE2KP61086 200 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 HBG1P69891 147 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 HBG2P69892 147 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 TNFRSF9Q07011 255 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 SPRNQ5BIV9 151 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 SPSB3Q6PJ21 355 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 DPPA3Q6W0C5 159 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 ZNF66Q6ZN08 573 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 PSG11Q9UQ72 335 aa19.99■□□□□ 0.79
TRIM54-201ENST00000296098 C17orf98A8MV24 154 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 MGST3O14880 152 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 ST8SIA5O15466 376 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 Q3ZCU0 254 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 THNSL2Q86YJ6 484 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 DEFB108AA8MXU0 73 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 HAPLN4Q86UW8 402 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 ZNF525Q8N782 197 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 ITLN1Q8WWA0 313 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 SLC35B3Q9H1N7 401 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 HSPB7Q9UBY9 170 aa19.98■□□□□ 0.79
TRIM54-201ENST00000296098 A8MXE2 369 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 BMP5P22003 454 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 BRWD1-AS2P59051 145 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 ARL16Q0P5N6 197 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 SPANXN5Q5MJ07 72 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 FAM122CQ6P4D5 195 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 LILRB2Q8N423 598 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 SCGB1C1Q8TD33 95 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 EDARADDQ8WWZ3 215 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 HSD17B10Q99714 261 aaKnown RBP19.97■□□□□ 0.79
TRIM54-201ENST00000296098 RBKSQ9H477 322 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 GZMHP20718 246 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 CCL20P78556 96 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 TLE4Q04727 773 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 FAM27E3Q08E93 113 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 LTC4SQ16873 150 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 SMDT1Q9H4I9 107 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 KIAA1456Q9P272 454 aa19.97■□□□□ 0.79
TRIM54-201ENST00000296098 H7C2Y5 167 aa19.96■□□□□ 0.79
TRIM54-201ENST00000296098 CLDN14O95500 239 aa19.96■□□□□ 0.79
TRIM54-201ENST00000296098 AGMATQ9BSE5 352 aa19.96■□□□□ 0.79
TRIM54-201ENST00000296098 MRPL37Q9BZE1 423 aaKnown RBP19.96■□□□□ 0.79
TRIM54-201ENST00000296098 JPT1Q9UK76 154 aa19.96■□□□□ 0.79
TRIM54-201ENST00000296098 LAMP3Q9UQV4 416 aa19.96■□□□□ 0.79
TRIM54-201ENST00000296098 DSPP15924 2871 aaKnown RBP19.96■□□□□ 0.79
TRIM54-201ENST00000296098 ZFHX2Q9C0A1 2572 aaPredicted RBP19.96■□□□□ 0.79
TRIM54-201ENST00000296098 LHBP01229 141 aa19.95■□□□□ 0.78
TRIM54-201ENST00000296098 KDF1Q8NAX2 398 aaPredicted RBP19.95■□□□□ 0.78
TRIM54-201ENST00000296098 GNG12Q9UBI6 72 aa19.95■□□□□ 0.78
TRIM54-201ENST00000296098 RIF1Q5UIP0 2472 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms