RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 WSB1Q9Y6I7 421 aa15.21■□□□□ 0.03
CDC42EP3-201ENST00000295324 SDK2Q58EX2 2172 aa15.21■□□□□ 0.02
CDC42EP3-201ENST00000295324 MBPP02686 304 aaPredicted RBP15.21■□□□□ 0.02
CDC42EP3-201ENST00000295324 GNG4P50150 75 aa15.21■□□□□ 0.02
CDC42EP3-201ENST00000295324 C9orf106Q8NAJ2 232 aa15.21■□□□□ 0.02
CDC42EP3-201ENST00000295324 ABHD14BQ96IU4 210 aa15.21■□□□□ 0.02
CDC42EP3-201ENST00000295324 SULT1A1P50225 295 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 CLRN3Q8NCR9 226 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 OR4X1Q8NH49 305 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 PERPQ96FX8 193 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 PRR13Q9NZ81 148 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 G0S2P27469 103 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 FDX2Q6P4F2 183 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 SIRT7Q9NRC8 400 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 METTL1Q9UBP6 276 aaKnown RBP15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 HSF4Q9ULV5 492 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 E9PLN8 166 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 HOXA4Q00056 320 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 BSPH1Q075Z2 132 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 KLF9Q13886 244 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 FAM78BQ5VT40 261 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 LILRB1Q8NHL6 650 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 VKORC1Q9BQB6 163 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 G6PC2Q9NQR9 355 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 ABHD12Q8N2K0 398 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 KCNK7Q9Y2U2 307 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 TRBV5-7A0A0A0MS05 114 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 HMSDA8MTL9 139 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 ID1P41134 155 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 CEBPDP49716 269 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 TMEM50BP56557 158 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 MEGF10Q96KG7 1140 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 RHOVQ96L33 236 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 NPAS1Q99742 590 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 TOLLIPQ9H0E2 274 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 TMEM106BQ9NUM4 274 aa15.2■□□□□ 0.02
CDC42EP3-201ENST00000295324 ZNF737O75373 536 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 IGSF11Q5DX21 431 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 MYPOPQ86VE0 399 aaPredicted RBP15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 STARD4Q96DR4 205 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 VAMP8Q9BV40 100 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 CLEC7AQ9BXN2 247 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 JPT1Q9UK76 154 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 PARD6AQ9NPB6 346 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 LOC102723971A0A1B0GUV8 181 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 CORTO00230 105 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 OR2J3O76001 311 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 LHX2P50458 406 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 CLDN18P56856 261 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 TEPPQ6URK8 271 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 SSMEM1Q8WWF3 244 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 PTPRFP10586 1907 aa15.19■□□□□ 0.02
CDC42EP3-201ENST00000295324 RNASEK-C17orf49H0YIS7 233 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 SCTP09683 121 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 MOGAT2Q3SYC2 334 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 UNQ6494/PRO21346Q6UXR6 183 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 TBR1Q16650 682 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 C10orf113Q5VZT2 155 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 ZNF645Q8N7E2 425 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 OR5P3Q8WZ94 311 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 PHYHIPLQ96FC7 376 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 CCDC88CQ9P219 2028 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 VSIG4Q9Y279 399 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 ZNF429Q86V71 674 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 WFDC3Q8IUB2 231 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 POM121Q96HA1 1249 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 SCMH1Q96GD3 660 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 MMP7P09237 267 aaPredicted RBP15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 RPL8P62917 257 aaKnown RBP15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 TEX261Q6UWH6 196 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 TMEM186Q96B77 213 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 U3KQ87 197 aa15.18■□□□□ 0.02
CDC42EP3-201ENST00000295324 IGHV2OR16-5A0A0B4J2B6 119 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 LMX1BO60663 402 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 HSBP1O75506 76 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 TBX6O95947 436 aaPredicted RBP15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 SCGB1C2P0DMR2 95 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 IGHV1-2P23083 117 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 ZNF154Q13106 437 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 UNQ5815/PRO19632Q6UWF5 114 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 FAM168AQ92567 244 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 PLSCR3Q9NRY6 295 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 HAX1O00165 279 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 ZNF273Q14593 569 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 UBE2V2Q15819 145 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 IFT22Q9H7X7 185 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 CACNA1BQ00975 2339 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 GATCO43716 136 aaKnown RBP15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 NEURL1O76050 574 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 GALR1P47211 349 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 AMTP48728 403 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 B2MP61769 119 aa15.17■□□□□ 0.02
CDC42EP3-201ENST00000295324 H0Y980 276 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 TMEM241Q24JQ0 296 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 UQCC3Q6UW78 93 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 ADAD2Q8NCV1 583 aaKnown RBP15.16■□□□□ 0.02
CDC42EP3-201ENST00000295324 OR4D10Q8NGI6 311 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms