RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 FAM90A7PA6NKC0 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A22PA8MWA6 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A12PA8MX19 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A5PA8MXJ8 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A23PA8MXZ1 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 KLF7O75840 302 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 KBTBD11O94819 623 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A15PP0C7V4 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A13PP0C7W8 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A14PP0C7W9 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 FAM90A24PP0C7X0 464 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 CYB561P49447 251 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 OR2Y1Q8NGV0 311 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 WDR54Q9H977 334 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 CBLN4Q9NTU7 201 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 TMEM242Q9NWH2 141 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 PI4KAP42356 2102 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 COL5A1P20908 1838 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 CACNA1EQ15878 2313 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 DVL1O14640 695 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 NXPH2O95156 264 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 GRPP07492 148 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 SELEP16581 610 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 KCNIP4Q6PIL6 250 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 CYP2G1PQ6ZSU1 146 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 PLPPR2Q96GM1 343 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 BATFQ16520 125 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 PSMG3Q9BT73 122 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 CHD3Q12873 2000 aaKnown RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 KIAA1324LA8MWY0 1029 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 HRASP01112 189 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 GNG3P63215 75 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 OR10P1Q8NGE3 313 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 OR5R1Q8NH85 324 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
CCNF-201ENST00000293968 DEPPQ9NTK1 212 aa12.48□□□□□ -0.41
CCNF-201ENST00000293968 DNAJC13O75165 2243 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 OR4A8P0C604 315 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 RAC2P15153 192 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 CASP6P55212 293 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 SLC10A1Q14973 349 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 RIPPLY2Q5TAB7 128 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 ZNF705AQ6ZN79 300 aaPredicted RBP12.47□□□□□ -0.41
CCNF-201ENST00000293968 CDH20Q9HBT6 801 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 TCFL5Q9UL49 500 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 PINLYPA6NC86 204 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 CELA3AP09093 270 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 TFF3Q07654 80 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 CXorf67Q86X51 503 aaPredicted RBP12.47□□□□□ -0.41
CCNF-201ENST00000293968 SPEM1Q8N4L4 309 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 A0A1B0GUS0 222 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 PAX5Q02548 391 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
CCNF-201ENST00000293968 NINJ1Q92982 152 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 RAB24Q969Q5 203 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 OR2D2Q9H210 308 aa12.47□□□□□ -0.41
CCNF-201ENST00000293968 LOC102723996A0A087X1L8 192 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 DNPH1O43598 174 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 COX5AP20674 150 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 NUBP1P53384 320 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 FAM234AQ9H0X4 552 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 TRAPPC1Q9Y5R8 145 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 PIGBOS1A0A0B4J2F0 54 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 EREGO14944 169 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 RAMP3O60896 148 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 PFN1P07737 140 aaKnown RBP12.46□□□□□ -0.41
CCNF-201ENST00000293968 RPL29P47914 159 aaKnown RBP12.46□□□□□ -0.41
CCNF-201ENST00000293968 GNB2P62879 340 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 IL11RAQ14626 422 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 MSMO1Q15800 293 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.41
CCNF-201ENST00000293968 DRAM1Q8N682 238 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 SPSB4Q96A44 273 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 CELSR3Q9NYQ7 3312 aa12.46□□□□□ -0.41
CCNF-201ENST00000293968 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.42
CCNF-201ENST00000293968 A8MWP6 167 aa12.46□□□□□ -0.42
CCNF-201ENST00000293968 MPLP40238 635 aa12.46□□□□□ -0.42
CCNF-201ENST00000293968 EDDM3BP56851 147 aa12.46□□□□□ -0.42
CCNF-201ENST00000293968 ZNF124Q15973 351 aa12.46□□□□□ -0.42
CCNF-201ENST00000293968 PATZ1Q9HBE1 687 aaKnown RBP12.46□□□□□ -0.42
CCNF-201ENST00000293968 NEIL1Q96FI4 390 aaPredicted RBP12.45□□□□□ -0.42
CCNF-201ENST00000293968 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 LY6G6EA0A0G2JKS1 128 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
CCNF-201ENST00000293968 CDIPTO14735 213 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms