RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 TFF3Q07654 80 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 C1orf229Q6ZS94 237 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-203ENST00000291300 CLEC18CQ8NCF0 446 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 PPP1R35Q8TAP8 253 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 STOML3Q8TAV4 291 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 IL22RA2Q969J5 263 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 WFDC1Q9HC57 220 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 ZC4H2Q9NQZ6 224 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 CISD1Q9NZ45 108 aaKnown RBP13.85□□□□□ -0.19
HIF3A-203ENST00000291300 FBXL17Q9UF56 701 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 NDRG3Q9UGV2 375 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 HCFC1P51610 2035 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 SPTBN1Q01082 2364 aaKnown RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 YLPM1P49750 1951 aaKnown RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 E5RGE8 158 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 TMEM178BH3BS89 294 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 SLC31A2O15432 143 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 GZMHP20718 246 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 APOBEC3AP31941 199 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 NKX2-1P43699 371 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 NHLH2Q02577 135 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 MORN2Q502X0 79 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 C14orf79Q96F83 325 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 DIRC2Q96SL1 478 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 REG4Q9BYZ8 158 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 ZNF665Q9H7R5 613 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 DYNLRB1Q9NP97 96 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 CALYQ9NYX4 217 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 RALYQ9UKM9 306 aaKnown RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 A0A1W2PPE3 182 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 LINC00473A8K010 186 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 C17orf98A8MV24 154 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 TMPRSS2O15393 492 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 SSSCA1O60232 199 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 MMP23AO75900 390 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 MUC1P15941 1255 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-203ENST00000291300 Q3ZCU0 254 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 ESCO2Q56NI9 601 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 ODF3L1Q8IXM7 274 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 TMED6Q8WW62 240 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 GNG12Q9UBI6 72 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 RNF115Q9Y4L5 304 aa13.84□□□□□ -0.19
HIF3A-203ENST00000291300 DUXBA0A1W2PPF3 345 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 FAM24AA6NFZ4 105 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 TUBAL3A6NHL2 446 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 PITX3O75364 302 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 ID3Q02535 119 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 ZNF816Q0VGE8 651 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-203ENST00000291300 FAM209AQ5JX71 171 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 LYPD2Q6UXB3 125 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 BAP18Q8IXM2 172 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 ZNF295-AS1Q8N0V1 137 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 PLA2G2EQ9NZK7 142 aa13.83□□□□□ -0.2
HIF3A-203ENST00000291300 LYNX1G3V0Z9 82 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 F2RL2O00254 374 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 SIGLEC5O15389 551 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 CLDN14O95500 239 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 LYNX1P0DP58 116 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 LPAR6P43657 344 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 TRAT1Q6PIZ9 186 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 PLEKHF2Q9H8W4 249 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 TMEM106BQ9NUM4 274 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 LIN7CQ9NUP9 197 aaKnown RBP13.82□□□□□ -0.2
HIF3A-203ENST00000291300 CACNG5Q9UF02 275 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 IGSF23A1L1A6 192 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 LGALS8O00214 317 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
HIF3A-203ENST00000291300 SPIN2AQ99865 258 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 SPIN2BQ9BPZ2 258 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 EGLN1Q9GZT9 426 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 PLEKHA2Q9HB19 425 aa13.82□□□□□ -0.2
HIF3A-203ENST00000291300 BARX1Q9HBU1 254 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-203ENST00000291300 LRRC30A6NM36 301 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 TPT1P13693 172 aaKnown RBP13.81□□□□□ -0.2
HIF3A-203ENST00000291300 EFNB3Q15768 340 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 SWI5Q1ZZU3 235 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 RPL39P5Q59GN2 51 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 OR6C3Q9NZP0 311 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 JPT1Q9UK76 154 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 KBTBD11-OT1A0A1B0GTJ5 212 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 VSTM5A8MXK1 200 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 CHST1O43916 411 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 S1PR2O95136 353 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 P2RY1P47900 373 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 AKR1C2P52895 323 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 PAX9P55771 341 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 AANATQ16613 207 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 NCR3LG1Q68D85 454 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 PDZD9Q8IXQ8 264 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 TCTEX1D2Q8WW35 142 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 PHYHIPLQ96FC7 376 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 SLC25A32Q9H2D1 315 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 IFI27L2Q9H2X8 130 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 C19orf12Q9NSK7 152 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 ZNRD1Q9P1U0 126 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 CLN8Q9UBY8 286 aa13.81□□□□□ -0.2
HIF3A-203ENST00000291300 ACACBO00763 2458 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms