RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 C6orf201Q7Z4U5 140 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 ODF3L1Q8IXM7 274 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 NANOGP1Q8N7R0 232 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 NPBQ8NG41 125 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 EDARADDQ8WWZ3 215 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 URM1Q9BTM9 101 aaKnown RBP10.93□□□□□ -0.66
TPM1-202ENST00000288398 RIMS4Q9H426 269 aaPredicted RBP10.93□□□□□ -0.66
TPM1-202ENST00000288398 SLC23A1Q9UHI7 598 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 MGAT4AQ9UM21 535 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 LINC01619G3V211 115 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 I3L521 148 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 RRHO14718 337 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 RBBP9O75884 186 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 GNB1P62873 340 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 C6orf141Q5SZD1 244 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 OR10K2Q6IF99 312 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 CEACAM19Q7Z692 300 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 SVOPQ8N4V2 548 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 DCUN1D4Q92564 292 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 RITA1Q96K30 269 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 IFI27L2Q9H2X8 130 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 FBXL15Q9H469 300 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 PLGRKTQ9HBL7 147 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 PLCXD1Q9NUJ7 323 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 SCN3BQ9NY72 215 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 WASHC3Q9Y3C0 194 aa10.92□□□□□ -0.66
TPM1-202ENST00000288398 NDUFA3O95167 84 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 BPNT1O95861 308 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 GNAO1P09471 354 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 ZBTB25P24278 435 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 RANBP1P43487 201 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 MRPS15P82914 257 aaKnown RBP10.91□□□□□ -0.66
TPM1-202ENST00000288398 PITPNAQ00169 270 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 MED22Q15528 200 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 RPL39P5Q59GN2 51 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 C5orf24Q7Z6I8 188 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 MINDY2Q8NBR6 621 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 OR6M1Q8NGM8 313 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 OR6Q1Q8NGQ2 317 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 FLYWCH2Q96CP2 140 aaKnown RBP10.91□□□□□ -0.66
TPM1-202ENST00000288398 ZNF221Q9UK13 617 aa10.91□□□□□ -0.66
TPM1-202ENST00000288398 PTGES3LE9PB15 166 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 APOA2P02652 100 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.66
TPM1-202ENST00000288398 CPEP16870 476 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 SRMP19623 302 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 CX3CL1P78423 397 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 INSL4Q14641 139 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 SPHARQ15513 63 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 ACTBL2Q562R1 376 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 C1orf100Q5SVJ3 147 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 UNQ5815/PRO19632Q6UWF5 114 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 GLDNQ6ZMI3 551 aaPredicted RBP10.9□□□□□ -0.66
TPM1-202ENST00000288398 PPP1R27Q86WC6 154 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 UFD1Q92890 307 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 OR4C12Q96R67 309 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 CLCC1Q96S66 551 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
TPM1-202ENST00000288398 NICN1Q9BSH3 213 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 TM2D1Q9BX74 207 aa10.9□□□□□ -0.66
TPM1-202ENST00000288398 METTL1Q9UBP6 276 aaKnown RBP10.9□□□□□ -0.66
TPM1-202ENST00000288398 C3orf84H3BNL1 204 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 SLC22A1O15245 554 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 CDK1P06493 297 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 OR8U9P0C7N5 309 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 ARSBP15848 533 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 CEACAM6P40199 344 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 SLURP1P55000 103 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 TPPP2P59282 170 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 HLA-DRB3P79483 266 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 CBX3Q13185 183 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 LRRTM1Q86UE6 522 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 ABHD14BQ96IU4 210 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 RNF5Q99942 180 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 ELOVL1Q9BW60 279 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 ALX4Q9H161 411 aaPredicted RBP10.89□□□□□ -0.67
TPM1-202ENST00000288398 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 C12orf4Q9NQ89 552 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 ZNF355PQ9NSJ1 428 aa10.89□□□□□ -0.67
TPM1-202ENST00000288398 ERICH4A6NGS2 130 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 H0YJW9 148 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 ITGB1BP1O14713 200 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 ARPC1BO15143 372 aaKnown RBP10.88□□□□□ -0.67
TPM1-202ENST00000288398 ARL6IP5O75915 188 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 NAPSAO96009 420 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
TPM1-202ENST00000288398 NDPQ00604 133 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 UNC119Q13432 240 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 KIAA0141Q14154 515 aaPredicted RBP10.88□□□□□ -0.67
TPM1-202ENST00000288398 P2RY14Q15391 338 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 ASPHD1Q5U4P2 390 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 CASTOR1Q8WTX7 329 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
TPM1-202ENST00000288398 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
TPM1-202ENST00000288398 MS4A10Q96PG2 267 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms