RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 POLR2GP62487 172 aaKnown RBP eCLIP17.4■□□□□ 0.38
YBX3-202ENST00000279550 CCL8P80075 99 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 EIF4EBP1Q13541 118 aaPredicted RBP17.4■□□□□ 0.38
YBX3-202ENST00000279550 IZUMO4Q1ZYL8 232 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 SWI5Q1ZZU3 235 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 STUMQ69YW2 141 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 DEFB108BQ8NET1 73 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 MAGT1Q9H0U3 335 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 MS4A5Q9H3V2 200 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 DYNLRB1Q9NP97 96 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 SDHAF2Q9NX18 166 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 FLNCQ14315 2725 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 RAI1Q7Z5J4 1906 aaPredicted RBP17.4■□□□□ 0.38
YBX3-202ENST00000279550 A6NNC1 897 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 GPR137BO60478 399 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 CD55P08174 381 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 NKX2-1P43699 371 aaPredicted RBP17.39■□□□□ 0.37
YBX3-202ENST00000279550 P2RX3P56373 397 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 TMEM33P57088 247 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 LTC4SQ16873 150 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 FAM209AQ5JX71 171 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 ZNF645Q8N7E2 425 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 TMED6Q8WW62 240 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 BARX1Q9HBU1 254 aaPredicted RBP17.39■□□□□ 0.37
YBX3-202ENST00000279550 ZFP57Q9NU63 452 aa17.39■□□□□ 0.37
YBX3-202ENST00000279550 A0A1W2PPR1 153 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 NXPH3O95157 252 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 EPHA1P21709 976 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 P2RY1P47900 373 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 RPL30P62888 115 aaKnown RBP17.38■□□□□ 0.37
YBX3-202ENST00000279550 THOC7Q6I9Y2 204 aaKnown RBP17.38■□□□□ 0.37
YBX3-202ENST00000279550 TRAT1Q6PIZ9 186 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 PPP1R35Q8TAP8 253 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 SDSLQ96GA7 329 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 GAFA1Q96PS6 74 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 WFDC1Q9HC57 220 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 MYO18BQ8IUG5 2567 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 USP9XQ93008 2570 aaPredicted RBP17.38■□□□□ 0.37
YBX3-202ENST00000279550 DSCAMO60469 2012 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 I3L521 148 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 TAAR5O14804 337 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 SPINT2O43291 252 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 IGKV1-5P01602 117 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 NINJ1Q92982 152 aa17.38■□□□□ 0.37
YBX3-202ENST00000279550 LIN7CQ9NUP9 197 aaKnown RBP17.38■□□□□ 0.37
YBX3-202ENST00000279550 PLA2G2AP14555 144 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 EDDM3BP56851 147 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 HTD2P86397 168 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 ID3Q02535 119 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 CR1LQ2VPA4 569 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 Q6ZRM9 215 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 CCL13Q99616 98 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 SPOCK3Q9BQ16 436 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 PFDN2Q9UHV9 154 aa17.37■□□□□ 0.37
YBX3-202ENST00000279550 DYSFO75923 2080 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 ST8SIA5O15466 376 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 FGF16O43320 207 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 SSSCA1O60232 199 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 PITX3O75364 302 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 GYPAP02724 150 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 TNFRSF1AP19438 455 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 GPR157Q5UAW9 335 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 ZNF561Q8N587 486 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 ABHD14BQ96IU4 210 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 PLEKHF2Q9H8W4 249 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 SAP30LQ9HAJ7 183 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 PSG11Q9UQ72 335 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 ABCA4P78363 2273 aa17.36■□□□□ 0.37
YBX3-202ENST00000279550 IGSF23A1L1A6 192 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 FAM24AA6NFZ4 105 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 GOSR1O95249 250 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 TMEM50AO95807 157 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 BTNL3Q6UXE8 466 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 FGFRL1Q8N441 504 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 FAM216BQ8N7L0 139 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 ZBTB34Q8NCN2 500 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 C14orf79Q96F83 325 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 EGLN1Q9GZT9 426 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 PKDREJQ9NTG1 2253 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 GAPDHP04406 335 aaKnown RBP17.35■□□□□ 0.37
YBX3-202ENST00000279550 CGB3P0DN86 165 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 CGB7P0DN87 165 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 GZMHP20718 246 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 LPAR6P43657 344 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 NHLH2Q02577 135 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 OR2B11Q5JQS5 317 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 UTF1Q5T230 341 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 TEX36Q5VZQ5 186 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 ZNF788Q6ZQV5 615 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 CBLN4Q9NTU7 201 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 PLA2G2EQ9NZK7 142 aa17.35■□□□□ 0.37
YBX3-202ENST00000279550 A0A1B0GU03 582 aa17.34■□□□□ 0.37
YBX3-202ENST00000279550 RNF212BA8MTL3 300 aa17.34■□□□□ 0.37
YBX3-202ENST00000279550 KIAA1324LA8MWY0 1029 aaPredicted RBP17.34■□□□□ 0.37
YBX3-202ENST00000279550 FAM157CP0CG43 387 aa17.34■□□□□ 0.37
YBX3-202ENST00000279550 BRWD1-AS2P59051 145 aa17.34■□□□□ 0.37
YBX3-202ENST00000279550 ODF3L1Q8IXM7 274 aa17.34■□□□□ 0.37
YBX3-202ENST00000279550 LSM10Q969L4 123 aaKnown RBP17.34■□□□□ 0.37
YBX3-202ENST00000279550 CALYQ9NYX4 217 aa17.34■□□□□ 0.37
YBX3-202ENST00000279550 J3QKU1 62 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms