RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DNAJC27Q9NZQ0 273 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 VAX2Q9UIW0 290 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 KCNE3Q9Y6H6 103 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 ASXL3Q9C0F0 2248 aa3.59□□□□□ -1.84
CD44-202ENST00000278385 EPG5Q9HCE0 2579 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 KMT2BQ9UMN6 2715 aaPredicted RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 TDRD6O60522 2096 aaKnown RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 APC2O95996 2303 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 EXOC1LA0A1B0GW35 172 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 J3QT63 122 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 MANBAO00462 879 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 EIF1BO60739 113 aaKnown RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 PTHP01270 115 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 IGHG1P01857 330 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 ESDP10768 282 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 ATF1P18846 271 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 OGNP20774 298 aaKnown RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 PAX6P26367 422 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 ERP29P30040 261 aaKnown RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 EIF1P41567 113 aaKnown RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 KIR2DS2P43631 304 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 REG1BP48304 166 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 GZMMP51124 257 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 MTPNP58546 118 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 DCDP81605 110 aaKnown RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 CDK10Q15131 360 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 RSU1Q15404 277 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 MICAQ29983 383 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 CDNFQ49AH0 187 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 C11orf71Q6IPW1 123 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 TMEM205Q6UW68 189 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 FOXL2NBQ6ZUU3 175 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 OAFQ86UD1 273 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 CARM1Q86X55 608 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 CADM2Q8N3J6 435 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 NEIL3Q8TAT5 605 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 ABHD3Q8WU67 409 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 SKA2Q8WVK7 121 aaPredicted RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 MARC2Q969Z3 335 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 NABP1Q96AH0 204 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
CD44-202ENST00000278385 PYURFQ96I23 114 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 C18orf12Q96KH6 178 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 FAM19A4Q96LR4 140 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 RDH12Q96NR8 316 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 IP6K3Q96PC2 410 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 TBX5Q99593 518 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 EMC6Q9BV81 110 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 SELENOIQ9C0D9 397 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 FAM60AQ9NP50 221 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 IDI2-AS1Q9NZ38 188 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 PROCRQ9UNN8 238 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 LAMA1P25391 3075 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 ACACAQ13085 2346 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 CACNA1GO43497 2377 aa3.58□□□□□ -1.84
CD44-202ENST00000278385 IGHV3OR16-12A0A075B7B8 117 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 IGKV1D-13A0A0B4J2D9 117 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 RBMY1BA6NDE4 496 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 RBMY1EA6NEQ0 496 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 OR4C46A6NHA9 309 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 K7EP13 123 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 PDE6DO43924 150 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 MOSP00540 346 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 IL3P08700 152 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 RBMY1DP0C7P1 496 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 RBMY1A1P0DJD3 496 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 IGKV1-13P0DP09 117 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 GABRR1P24046 479 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 MEOX2P50222 304 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 RP1P56715 2156 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 RAP1BP61224 184 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 CRADDP78560 199 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 RELAQ04206 551 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 PRDX1Q06830 199 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 ZNF266Q14584 549 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 SURF2Q15527 256 aaPredicted RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 ZNF630Q2M218 657 aaPredicted RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 SMIM21Q3B7S5 101 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 ACOT6Q3I5F7 207 aaPredicted RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 TMEM78Q5T7P6 136 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 TEX36Q5VZQ5 186 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 SPNS3Q6ZMD2 512 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 LRRTM1Q86UE6 522 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 ANGPTL5Q86XS5 388 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 COL27A1Q8IZC6 1860 aaPredicted RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 WDFY3Q8IZQ1 3526 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 SLC35F6Q8N357 371 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 CHST4Q8NCG5 386 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 OR5AP2Q8NGF4 316 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 OR4P4Q8NGL7 312 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 MCFD2Q8NI22 146 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 GRPEL2Q8TAA5 225 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 FLVCR1-AS1Q8TAF5 88 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 CYGBQ8WWM9 190 aa3.57□□□□□ -1.84
CD44-202ENST00000278385 SRSF12Q8WXF0 261 aaKnown RBP3.57□□□□□ -1.84
CD44-202ENST00000278385 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms