RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 OR8D4Q8NGM9 314 aa17.61■□□□□ 0.41
CACNA1B-201ENST00000277549 LYRM2Q9NU23 88 aaPredicted RBP17.61■□□□□ 0.41
CACNA1B-201ENST00000277549 CALYQ9NYX4 217 aa17.61■□□□□ 0.41
CACNA1B-201ENST00000277549 B4E171 279 aa17.61■□□□□ 0.41
CACNA1B-201ENST00000277549 PGPA6NDG6 321 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 CD69Q07108 199 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 PRSS54Q6PEW0 395 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 ZNF721Q8TF20 911 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 CROCCQ5TZA2 2017 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 IGHV1-69-2A0A0G2JMI3 117 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 CTSDP07339 412 aaPredicted RBP17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 P2RY1P47900 373 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 TMEM52Q8NDY8 209 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 IGF2P01344 180 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 LINC00869P0C866 280 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 SNRPD3P62318 126 aaKnown RBP17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 PXMP4Q9Y6I8 212 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 CNTRLQ7Z7A1 2325 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 A0A0J9YW62 118 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 IGHV3-11P01762 117 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 OR5AU1Q8NGC0 362 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 GLMPQ8WWB7 406 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 ATG101Q9BSB4 218 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 DIRC3C9JPN6 131 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 EFNB2P52799 333 aa17.6■□□□□ 0.41
CACNA1B-201ENST00000277549 PRR32B1ATL7 298 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 RCC1P18754 421 aaPredicted RBP17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 AWAT1Q58HT5 328 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 ABLIM2Q6H8Q1 611 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 ZPLD1Q8TCW7 415 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 ANAPC16Q96DE5 110 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 LINC01587Q99440 93 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 HIST1H4GQ99525 98 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 WNT5BQ9H1J7 359 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 TDGF1P13385 188 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 ZFP30Q9Y2G7 519 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 CLRN3Q8NCR9 226 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 FAM131CQ96AQ9 280 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 COX14Q96I36 57 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 OR4D11Q8NGI4 311 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 SCMH1Q96GD3 660 aa17.59■□□□□ 0.41
CACNA1B-201ENST00000277549 SLC22A18ASQ8N1D0 253 aa17.58■□□□□ 0.41
CACNA1B-201ENST00000277549 TMEM101Q96IK0 257 aa17.58■□□□□ 0.41
CACNA1B-201ENST00000277549 A0A1B0GV72 72 aa17.58■□□□□ 0.41
CACNA1B-201ENST00000277549 LDLRAD4O15165 306 aa17.58■□□□□ 0.41
CACNA1B-201ENST00000277549 SCTP09683 121 aa17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 PEBP1P30086 187 aaKnown RBP17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 EEF1AKMT3Q96AZ1 226 aa17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 IDI2-AS1Q9NZ38 188 aa17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 ACAA1P09110 424 aaPredicted RBP17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 ZNF415Q09FC8 603 aa17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 SLC17A5Q9NRA2 495 aa17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 RNASE4P34096 147 aaKnown RBP17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 ZNF343Q6P1L6 599 aa17.58■□□□□ 0.4
CACNA1B-201ENST00000277549 MFAP4P55083 255 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 DXOO77932 396 aaKnown RBP17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 LSM6P62312 80 aaKnown RBP17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 LIMS2Q7Z4I7 341 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 TEX29Q8N6K0 151 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 MALP21145 153 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 NFAM1Q8NET5 270 aaPredicted RBP17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 BGLAPP02818 100 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 RUNX1Q01196 453 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 PRR33A8MZF0 331 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 MIOXQ9UGB7 285 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 LOC101059948A0A1B0GTJ6 334 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 MOSP00540 346 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 MFAP2P55001 183 aa17.57■□□□□ 0.4
CACNA1B-201ENST00000277549 TRGV2A0A075B6R0 118 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 A6NDN8 102 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 RFLNBQ8N5W9 214 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 RELQ04864 619 aaPredicted RBP17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 VAX2Q9UIW0 290 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 PDE6DO43924 150 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 CD99P14209 185 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 Q71RC1 249 aaPredicted RBP17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 RBKSQ9H477 322 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 CEACAM4O75871 244 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 SAA1P0DJI8 122 aaPredicted RBP17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 FAM159AQ6UWV7 190 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 TCRBV16S1A1N1A0A5B0 115 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 TSPAN13O95857 204 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 HPRT1P00492 218 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 ST6GAL2Q96JF0 529 aa17.56■□□□□ 0.4
CACNA1B-201ENST00000277549 RPL34P49207 117 aaKnown RBP17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 NRN1LQ496H8 165 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 A0A1B0GUL6 1792 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 FAM168AQ92567 244 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 NUDT16L1Q9BRJ7 211 aaKnown RBP17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 FAM201AQ5SY85 155 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 OPN4Q9UHM6 478 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 ANKRD20A5PA0PJZ0 165 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 GDF9O60383 454 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 SCNM1Q9BWG6 230 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 RBM11P57052 281 aaKnown RBP17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 KLHDC2Q9Y2U9 406 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 SCN3AQ9NY46 2000 aa17.55■□□□□ 0.4
CACNA1B-201ENST00000277549 EPOPA6NHQ4 379 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms