RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.81
VPS33A-201ENST00000267199 RTL8BQ17RB0 113 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 STPG1Q5TH74 334 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 ZADH2Q8N4Q0 377 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM230Q96A57 120 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 R3HDM4Q96D70 268 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 PARLQ9H300 379 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 WASHC3Q9Y3C0 194 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 HS3ST3B1Q9Y662 390 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 NPIPB13A6NJU9 1138 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 NPIPB4C9JG80 1138 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 E9PQ18 207 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 F8VVB4 439 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 F8VWA3 439 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 CNIH1O95406 144 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 MELTFP08582 738 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 TCTAP57738 103 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 NHLH1Q02575 133 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 LBHQ53QV2 105 aaPredicted RBP9.96□□□□□ -0.82
VPS33A-201ENST00000267199 FA2HQ7L5A8 372 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 KLHDC3Q9BQ90 382 aa9.96□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF891A8MT65 544 aaPredicted RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 K7EQM0 130 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H1BP16401 226 aaKnown RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 BPIFB3P59826 476 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF766Q5HY98 468 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 TMEM183AQ8IXX5 376 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 ATOH7Q8N100 152 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 TPRX1Q8N7U7 411 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 POM121L2Q96KW2 1035 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 Q96M66 194 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 MT-CO3P00414 261 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 FAM162BQ5T6X4 162 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 SELENOHQ8IZQ5 122 aaKnown RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 RAB24Q969Q5 203 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 GINS3Q9BRX5 216 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 CHRNA10Q9GZZ6 450 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 AKIRIN1Q9H9L7 192 aaPredicted RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 TRAV38-1A0A0B4J264 116 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 M0R1B8 84 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 SRSF10O75494 262 aaKnown RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 SLC25A5P05141 298 aaKnown RBP9.95□□□□□ -0.82
VPS33A-201ENST00000267199 CCL20P78556 96 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 COL10A1Q03692 680 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 SH2D2AQ9NP31 389 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 PDE6DO43924 150 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 LTBRP36941 435 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 FNDC7Q5VTL7 733 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 OR2Z1Q8NG97 314 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 OR10X1Q8NGY0 326 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 FGF11Q92914 225 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 AUP1Q9Y679 476 aa9.95□□□□□ -0.82
VPS33A-201ENST00000267199 HELTA6NFD8 242 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 AGAP20933 346 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 NPBWR2P48146 333 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 DMRTA1Q5VZB9 504 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF818PQ6ZRF7 136 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 OR2D3Q8NGH3 330 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 HES4Q9HCC6 221 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 SUCLG1P53597 346 aaKnown RBP9.94□□□□□ -0.82
VPS33A-201ENST00000267199 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
VPS33A-201ENST00000267199 CHRDL1Q9BU40 450 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 ACACAQ13085 2346 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 DIDO1Q9BTC0 2240 aaKnown RBP9.94□□□□□ -0.82
VPS33A-201ENST00000267199 PGLYRP1O75594 196 aaPredicted RBP9.94□□□□□ -0.82
VPS33A-201ENST00000267199 IGFBP3P17936 291 aaPredicted RBP9.94□□□□□ -0.82
VPS33A-201ENST00000267199 CD82P27701 267 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 BRS3P32247 399 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 HERPUD1Q15011 391 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF124Q15973 351 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 OR8I2Q8N0Y5 310 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 OR5A2Q8NGI9 324 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 VOPP1Q96AW1 172 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 MESP1Q9BRJ9 268 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF355PQ9NSJ1 428 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 TINAGQ9UJW2 476 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 NKX6-3A6NJ46 265 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 RAB29O14966 203 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 HTR1DP28221 377 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 OPRK1P41145 380 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 CTAG1AP78358 180 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 SPATA45Q537H7 98 aa9.94□□□□□ -0.82
VPS33A-201ENST00000267199 ZNF506Q5JVG8 444 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms