RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 NPIPB7O75200 414 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 ARR3P36575 388 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 GPR12P47775 334 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 MOB1BQ7L9L4 216 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 OR1K1Q8NGR3 316 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 GALNT14Q96FL9 552 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 Q96M66 194 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 P2RX4Q99571 388 aa9.94□□□□□ -0.82
CLSTN3-201ENST00000266546 A0A087WWC5 75 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 TIMM8AO60220 97 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 TNFSF4P23510 183 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 RBM11P57052 281 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 FAM166AQ6J272 317 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HEPN1Q6WQI6 88 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 Q6ZN92 141 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 GPHA2Q96T91 129 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 OTOGLQ3ZCN5 2332 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 CACNA1DQ01668 2161 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 IGKV1D-43A0A0B4J1Z2 117 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 RPL36A-HNRNPH2H7BZ11 118 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 AQP7O14520 342 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 GDF9O60383 454 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BKO60814 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BJP06899 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 PSG2P11465 335 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BOP23527 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BBP33778 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BDP58876 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BCP62807 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST2H2BEQ16778 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 TBC1D28Q2M2D7 210 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 VN1R17PQ8TDU5 208 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 CORO2AQ92828 525 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BHQ93079 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BNQ99877 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 HIST1H2BMQ99879 126 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 MESP1Q9BRJ9 268 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 ELOVL1Q9BW60 279 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 RTN4RQ9BZR6 473 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 NAGKQ9UJ70 344 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 CRYABP02511 175 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 F2RP25116 425 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 CTAG1AP78358 180 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 MZT1Q08AG7 82 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 SLC25A47Q6Q0C1 308 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 SGMS2Q8NHU3 365 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 ZNF385AQ96PM9 386 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 TAAR6Q96RI8 345 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 OR2W1Q9Y3N9 320 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 SPNS3Q6ZMD2 512 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 MYPOPQ86VE0 399 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 OR8G5Q8NG78 346 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 SRD5A3Q9H8P0 318 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 FBLN5Q9UBX5 448 aa9.93□□□□□ -0.82
CLSTN3-201ENST00000266546 CEP192Q8TEP8 1941 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 IGSF23A1L1A6 192 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 TAS2R45P59539 299 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 ZNF124Q15973 351 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 MARS2Q96GW9 593 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 CISD1Q9NZ45 108 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 ARL2-SNX15V9GYD0 113 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 CRYAAP02489 173 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 BCL3P20749 454 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 SPINK9Q5DT21 86 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 PYY3Q5JQD4 70 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 TP53RKQ96S44 253 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 RPRMQ9NS64 109 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 BET1LQ9NYM9 111 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 TAAR3PQ9P1P4 343 aa9.92□□□□□ -0.82
CLSTN3-201ENST00000266546 LOC102723971A0A1B0GUV8 181 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 LDLRAD4O15165 306 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 ZNF253O75346 499 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 NGFP01138 241 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 SPATA46Q5T0L3 261 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 ETFRF1Q6IPR1 90 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 TMPRSS7Q7RTY8 843 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 WFDC8Q8IUA0 241 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 STARD4Q96DR4 205 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 TRIB1Q96RU8 372 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 RNF122Q9H9V4 155 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 GLRX2Q9NS18 164 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 A0A0J9YW62 118 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 TCF21O43680 179 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 CCL2P13500 99 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 SPCS3P61009 180 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 SUPT4H1P63272 117 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 MPDZO75970 2070 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 PMS2P1A4D2B8 440 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 SLC22A20A6NK97 555 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 TRAF3IP2O43734 574 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 SCTP09683 121 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 UCNP55089 124 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 UCP3P55916 312 aa9.91□□□□□ -0.82
CLSTN3-201ENST00000266546 UBE2G1P62253 170 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms