RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 KCTD7Q96MP8 289 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 NABP2Q9BQ15 211 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 TM2D1Q9BX74 207 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 TMEM59Q9BXS4 323 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 SCN3BQ9NY72 215 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 NKX1-2Q9UD57 310 aaPredicted RBP7.61□□□□□ -1.19
VPS41-201ENST00000265745 ZNF580Q9UK33 172 aa7.61□□□□□ -1.19
VPS41-201ENST00000265745 TMEM14DPA8MWL7 114 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 SLC2A2P11168 524 aaPredicted RBP7.6□□□□□ -1.19
VPS41-201ENST00000265745 VDAC1P21796 283 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 PSMB8P28062 276 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 BLVRBP30043 206 aaPredicted RBP7.6□□□□□ -1.19
VPS41-201ENST00000265745 OR3A3P47888 321 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 ACTBP60709 375 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 MED22Q15528 200 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 HSD17B12Q53GQ0 312 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 RBM48Q5RL73 367 aaKnown RBP7.6□□□□□ -1.19
VPS41-201ENST00000265745 ZNF880Q6PDB4 577 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 FAM89BQ8N5H3 189 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 CLRN3Q8NCR9 226 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 OR2AK2Q8NG84 335 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 OR8U1Q8NH10 309 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 NRG4Q8WWG1 115 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 TMEM203Q969S6 136 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 ZNF251Q9BRH9 671 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 CHCHD6Q9BRQ6 235 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 NICN1Q9BSH3 213 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 MRPL20Q9BYC9 149 aaKnown RBP7.6□□□□□ -1.19
VPS41-201ENST00000265745 IFI27L2Q9H2X8 130 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 CDIP1Q9H305 208 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 KCNK15Q9H427 330 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 DUSP21Q9H596 190 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 ABRACLQ9P1F3 81 aa7.6□□□□□ -1.19
VPS41-201ENST00000265745 ZNF107Q9UII5 783 aaPredicted RBP7.6□□□□□ -1.19
VPS41-201ENST00000265745 SAA2-SAA4A0A096LPE2 208 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 A0A0A6YYD4 124 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 TRBV6-6A0A0A6YYG2 114 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 SAA2P0DJI9 122 aaPredicted RBP7.59□□□□□ -1.19
VPS41-201ENST00000265745 OR5H8P0DN80 308 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 MYF6P23409 242 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 CNTFRP26992 372 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 PPIFP30405 207 aaKnown RBP7.59□□□□□ -1.19
VPS41-201ENST00000265745 RPL11P62913 178 aaKnown RBP7.59□□□□□ -1.19
VPS41-201ENST00000265745 TPBGQ13641 420 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 KIAA0141Q14154 515 aaPredicted RBP7.59□□□□□ -1.19
VPS41-201ENST00000265745 DEFB136Q30KP8 78 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 VAX1Q5SQQ9 334 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 LIPKQ5VXJ0 399 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 TMEM91Q6ZNR0 172 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 NPBQ8NG41 125 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 OR6M1Q8NGM8 313 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 MYOZ3Q8TDC0 251 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 C4orf3Q8WVX3 66 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 IL1F10Q8WWZ1 152 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 UFD1Q92890 307 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 GFI1Q99684 422 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 AGMATQ9BSE5 352 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 ANKRD60Q9BZ19 345 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 LPAR5Q9H1C0 372 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 KLK15Q9H2R5 256 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 OR51J1Q9H342 316 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 RIMS4Q9H426 269 aaPredicted RBP7.59□□□□□ -1.19
VPS41-201ENST00000265745 PLEKHJ1Q9NW61 149 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 ZMAT5Q9UDW3 170 aaKnown RBP7.59□□□□□ -1.19
VPS41-201ENST00000265745 STEAP1Q9UHE8 339 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 TPRKBQ9Y3C4 175 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 WSB1Q9Y6I7 421 aa7.59□□□□□ -1.19
VPS41-201ENST00000265745 IGHV7-81A0A0B4J1V7 117 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 G3V318 75 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 RAB29O14966 203 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 NBR2O15453 112 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 SOCS1O15524 211 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 HSMCR30P0CW71 290 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 CT45A6P0DMU7 189 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 CT45A5P0DMU8 189 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 CT45A7P0DMV0 189 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 AQP4P55087 323 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 RAB25P57735 213 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 DGCR2P98153 550 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 FHL3Q13643 280 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 C5orf64Q2M2E5 130 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 LIN54Q6MZP7 749 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 FAM71F2Q6NXP2 309 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 MINDY2Q8NBR6 621 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 OR5M8Q8NGP6 311 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 PARP12Q9H0J9 701 aaKnown RBP7.58□□□□□ -1.2
VPS41-201ENST00000265745 PIPOXQ9P0Z9 390 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 SLC23A1Q9UHI7 598 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 SCOCQ9UIL1 159 aa7.58□□□□□ -1.2
VPS41-201ENST00000265745 TRAV41A0A0B4J266 112 aa7.57□□□□□ -1.2
VPS41-201ENST00000265745 FOXI3A8MTJ6 420 aaPredicted RBP7.57□□□□□ -1.2
VPS41-201ENST00000265745 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
VPS41-201ENST00000265745 SLC17A2O00624 439 aa7.57□□□□□ -1.2
VPS41-201ENST00000265745 ITGB1BP1O14713 200 aa7.57□□□□□ -1.2
VPS41-201ENST00000265745 ATP6V0E1O15342 81 aa7.57□□□□□ -1.2
VPS41-201ENST00000265745 RGS10O43665 173 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms