RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 HERVK_113P61574 105 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 CTAG1AP78358 180 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 FOXJ2Q9P0K8 574 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 COL24A1Q17RW2 1714 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 SHISA3A0PJX4 238 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
SMG6-201ENST00000263073 RHBDD2Q6NTF9 364 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 TMEM108Q6UXF1 575 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 KLK15Q9H2R5 256 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 ZNF107Q9UII5 783 aaPredicted RBP10.44□□□□□ -0.74
SMG6-201ENST00000263073 LGALS7P47929 136 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 GPR146Q96CH1 333 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 SSBP3Q9BWW4 388 aaPredicted RBP10.44□□□□□ -0.74
SMG6-201ENST00000263073 REG1AP05451 166 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 TFPI2P48307 235 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 PSG4Q00888 419 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 MEF2BQ02080 365 aaPredicted RBP10.44□□□□□ -0.74
SMG6-201ENST00000263073 RABAC1Q9UI14 185 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 K7ERU9 68 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 NXPH1P58417 271 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 OR1L1Q8NH94 360 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 IL19Q9UHD0 177 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 INSIG2Q9Y5U4 225 aa10.44□□□□□ -0.74
SMG6-201ENST00000263073 TRAV17A0A0B4J275 112 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 HOXA4Q00056 320 aaPredicted RBP10.43□□□□□ -0.74
SMG6-201ENST00000263073 NAAAQ02083 359 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 ZPBPQ9BS86 351 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 ALX4Q9H161 411 aaPredicted RBP10.43□□□□□ -0.74
SMG6-201ENST00000263073 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
SMG6-201ENST00000263073 AUP1Q9Y679 476 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 LINC01387J3KSC0 135 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 SELENOHQ8IZQ5 122 aaKnown RBP10.43□□□□□ -0.74
SMG6-201ENST00000263073 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 J3QT63 122 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 FBLIM1Q8WUP2 373 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 GCGP01275 180 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 HBZP02008 142 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 CDX1P47902 265 aaPredicted RBP10.43□□□□□ -0.74
SMG6-201ENST00000263073 UNC119Q13432 240 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 THYN1Q9P016 225 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 LY75O60449 1722 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 ZG16O60844 167 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 PGLYRP1O75594 196 aaPredicted RBP10.43□□□□□ -0.74
SMG6-201ENST00000263073 KBTBD11O94819 623 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 CD82P27701 267 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 AQP3Q92482 292 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 TMEM222Q9H0R3 208 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 PRNDQ9UKY0 176 aa10.43□□□□□ -0.74
SMG6-201ENST00000263073 TRBV5-5A0A0J9YX44 114 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 GSN-AS1Q9NRJ2 163 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 KCNE5Q9UJ90 142 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 TCFL5Q9UL49 500 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 HIGD1AQ9Y241 93 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 TSPAN2O60636 221 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 NUBP1P53384 320 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 C14orf144Q96I85 54 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 LRRC3BQ96PB8 259 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 IMMP2LQ96T52 175 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 CCL13Q99616 98 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 HILPDAQ9Y5L2 63 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 PATE3B3GLJ2 98 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 ZNF324O75467 553 aaPredicted RBP10.42□□□□□ -0.74
SMG6-201ENST00000263073 CRYBB3P26998 211 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 VAX1Q5SQQ9 334 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 Q8WTZ3 238 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 TUBD1Q9UJT1 453 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 AMMECR1Q9Y4X0 333 aaPredicted RBP10.42□□□□□ -0.74
SMG6-201ENST00000263073 LIFP15018 202 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 AGAP20933 346 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 CBLN1P23435 193 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 FCARP24071 287 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 TAF15Q92804 592 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMG6-201ENST00000263073 CEACAM18A8MTB9 384 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 MPTX1A8MV57 137 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 OR2H2O95918 312 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 FABP2P12104 132 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 EPHA8P29322 1005 aaPredicted RBP10.42□□□□□ -0.74
SMG6-201ENST00000263073 KIR2DL1P43626 348 aaPredicted RBP10.42□□□□□ -0.74
SMG6-201ENST00000263073 KIR2DL2P43627 348 aaPredicted RBP10.42□□□□□ -0.74
SMG6-201ENST00000263073 CCL8P80075 99 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 CADM4Q8NFZ8 388 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 GRAMD2BQ96HH9 432 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 ADTRPQ96IZ2 230 aa10.42□□□□□ -0.74
SMG6-201ENST00000263073 C7orf71A4D174 169 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 MMDQ15546 238 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 PLPPR5Q32ZL2 321 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 SPSB2Q99619 263 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 RNF7Q9UBF6 113 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 ZDHHC8Q9ULC8 765 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
SMG6-201ENST00000263073 IGHV5-10-1A0A0J9YXX1 117 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 TMEM189A5PLL7 270 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 PGPA6NDG6 321 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
SMG6-201ENST00000263073 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms