RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IGHV4-61A0A0C4DH41 118 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 RBM39Q14498 530 aaKnown RBP22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 Q5PR19 223 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 ZNF841Q6ZN19 808 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 CLDND2Q8NHS1 167 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 KAAG1Q9UBP8 84 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 FSTL3O95633 263 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 WNT2P09544 360 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 IL2RGP31785 369 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 KRBOX4Q5JUW0 171 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 KRTAP1-3Q8IUG1 177 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 MRPL30Q8TCC3 161 aaKnown RBP22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 GPX8Q8TED1 209 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 MALSU1Q96EH3 234 aa22.77■■□□□ 1.24
SMARCD3-201ENST00000262188 VWC2LB2RUY7 222 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 PHF1O43189 567 aaPredicted RBP22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 NDUFB3O43676 98 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 BPIFB3P59826 476 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 ZNF497Q6ZNH5 498 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 UBALD1Q8TB05 177 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 NINJ1Q92982 152 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 ARL11Q969Q4 196 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 ST6GALNAC5Q9BVH7 336 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 C19orf12Q9NSK7 152 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 CCDC168Q8NDH2 2452 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 ARHGAP32A7KAX9 2087 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 IGKV1D-8A0A087WSZ0 117 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 OR8U8P0C7N1 319 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 PNLIPRP3Q17RR3 467 aa22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 PATZ1Q9HBE1 687 aaKnown RBP22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 PRRC2AP48634 2157 aaKnown RBP22.76■■□□□ 1.23
SMARCD3-201ENST00000262188 MALRD1Q5VYJ5 2156 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 MGST3O14880 152 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 OR2F2O95006 317 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 NPBWR1P48145 328 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 OR2F1Q13607 317 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 LRRC75A-AS1Q8N1F1 130 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 KCNRGQ8N5I3 272 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 FCAMRQ8WWV6 532 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 H1FXQ92522 213 aaKnown RBP22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 HRASLSQ9HDD0 168 aa22.75■■□□□ 1.23
SMARCD3-201ENST00000262188 GABARAPH6UMI1 98 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 NAPSAO96009 420 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 FCGR3AP08637 254 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 OR52W1Q6IF63 320 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 IL34Q6ZMJ4 242 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 NEIL1Q96FI4 390 aaPredicted RBP22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 FLNBO75369 2602 aaKnown RBP22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 KANTRA0A1W2PQU2 76 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 FGF16O43320 207 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 GDNFP39905 211 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 PKIAP61925 76 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 LRRC10Q5BKY1 277 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 OR8B3Q8NGG8 313 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 OR8B2Q96RD0 313 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 AKAP9Q99996 3911 aa22.74■■□□□ 1.23
SMARCD3-201ENST00000262188 NDUFS8O00217 210 aa22.73■■□□□ 1.23
SMARCD3-201ENST00000262188 ARPC1BO15143 372 aaKnown RBP22.73■■□□□ 1.23
SMARCD3-201ENST00000262188 CSN2P05814 226 aa22.73■■□□□ 1.23
SMARCD3-201ENST00000262188 LMO4P61968 165 aa22.73■■□□□ 1.23
SMARCD3-201ENST00000262188 PPP1R35Q8TAP8 253 aa22.73■■□□□ 1.23
SMARCD3-201ENST00000262188 HIST1H1BP16401 226 aaKnown RBP22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 ARL6IP1Q15041 203 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 MAPK1IP1LQ8NDC0 245 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 OR13A1Q8NGR1 328 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 FAM234AQ9H0X4 552 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 DOCK11Q5JSL3 2073 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 TMEM30CPA0ZSE6 113 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 F5H0A9 414 aaPredicted RBP22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 BCL2L11O43521 198 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 MRPS10P82664 201 aaKnown RBP22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 WDR25Q64LD2 544 aaPredicted RBP22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 OR5D13Q8NGL4 314 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 MRGPRDQ8TDS7 321 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 HIST1H2BAQ96A08 127 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 BEX1Q9HBH7 125 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 CLN8Q9UBY8 286 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 TRAPPC2LQ9UL33 140 aa22.72■■□□□ 1.23
SMARCD3-201ENST00000262188 ODAMA1E959 279 aa22.71■■□□□ 1.23
SMARCD3-201ENST00000262188 LY86O95711 162 aa22.71■■□□□ 1.23
SMARCD3-201ENST00000262188 PPT1P50897 306 aa22.71■■□□□ 1.23
SMARCD3-201ENST00000262188 SLC35E4Q6ICL7 350 aa22.71■■□□□ 1.23
SMARCD3-201ENST00000262188 TCF23Q7RTU1 214 aa22.71■■□□□ 1.23
SMARCD3-201ENST00000262188 Q96MF0 132 aa22.71■■□□□ 1.23
SMARCD3-201ENST00000262188 HNF4GQ14541 408 aa22.7■■□□□ 1.23
SMARCD3-201ENST00000262188 GAPTQ8N292 157 aa22.7■■□□□ 1.23
SMARCD3-201ENST00000262188 C15orf40Q8WUR7 153 aa22.7■■□□□ 1.23
SMARCD3-201ENST00000262188 MTFP1Q9UDX5 166 aa22.7■■□□□ 1.23
SMARCD3-201ENST00000262188 NOTCH2Q04721 2471 aa22.7■■□□□ 1.23
SMARCD3-201ENST00000262188 CA11O75493 328 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 NDUFB6O95139 128 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 ZFP36P26651 326 aaKnown RBP22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 GLP1RP43220 463 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 DSCR9P59020 149 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 C1QL4Q86Z23 238 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 PRR18Q8N4B5 295 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 OR1S2Q8NGQ3 325 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 FLVCR2Q9UPI3 526 aa22.7■■□□□ 1.22
SMARCD3-201ENST00000262188 BTBD17A6NE02 478 aa22.69■■□□□ 1.22
SMARCD3-201ENST00000262188 TSTD3H0UI37 97 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms