RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 RCC1LQ96I51 464 aaKnown RBP11.98□□□□□ -0.49
TUBGCP3-201ENST00000261965 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
TUBGCP3-201ENST00000261965 ABHD14BQ96IU4 210 aa11.98□□□□□ -0.49
TUBGCP3-201ENST00000261965 OR2H1Q9GZK4 316 aa11.98□□□□□ -0.49
TUBGCP3-201ENST00000261965 PITPNC1Q9UKF7 332 aa11.98□□□□□ -0.49
TUBGCP3-201ENST00000261965 LINC00205P59089 165 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 SLC25A53Q5H9E4 307 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 TDHQ8IZJ6 230 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 FAM58AQ8N1B3 248 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 OR4A16Q8NH70 328 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 WNT5BQ9H1J7 359 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 IGHV1-45A0A0A0MS14 117 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 SLC22A20A6NK97 555 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 FCN1O00602 326 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 ZNF826PQ6ZT77 177 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 VKORC1L1Q8N0U8 176 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 RHBDD1Q8TEB9 315 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 GINS3Q9BRX5 216 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 SIRT7Q9NRC8 400 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 SYNGR3O43761 229 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 FCGR3BO75015 233 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 CELA3AP09093 270 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 COX6A1P12074 109 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 F2RP25116 425 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 TFPI2P48307 235 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 IL24Q13007 206 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 SLC10A1Q14973 349 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 TMEM54Q969K7 222 aa11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 MSI2Q96DH6 328 aaKnown RBP11.97□□□□□ -0.49
TUBGCP3-201ENST00000261965 CEACAM18A8MTB9 384 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 C1QTNF9BB2RNN3 333 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 ERVK-16P61578 105 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 CPEB3Q8NE35 698 aaKnown RBP11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 OR1P1Q8NH06 330 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 OR4X1Q8NH49 305 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 HIST1H2BLQ99880 126 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 ZNF552Q9H707 407 aaPredicted RBP11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 TUBD1Q9UJT1 453 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 RNF24Q9Y225 148 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 CPAMD8Q8IZJ3 1885 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 TCF21O43680 179 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 PITX3O75364 302 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 PGLYRP1O75594 196 aaPredicted RBP11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 GYPAP02724 150 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 IER3P46695 156 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 RAC3P60763 192 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 KCNMB1Q16558 191 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 DNASE2BQ8WZ79 361 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 SGK494Q96LW2 274 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 B4GALT7Q9UBV7 327 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 NAT8BQ9UHF3 227 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 ANAPC10Q9UM13 185 aa11.96□□□□□ -0.49
TUBGCP3-201ENST00000261965 K7N7A8 449 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 LYL1P12980 280 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 CTAG1AP78358 180 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 MEF2BQ02080 365 aaPredicted RBP11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 AESQ08117 197 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 C10orf91Q5T1B1 145 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 ZDHHC16Q969W1 377 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 SH3BGRL2Q9UJC5 107 aa11.96□□□□□ -0.5
TUBGCP3-201ENST00000261965 A8MXE2 369 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 RHBDL1O75783 438 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 LYZL6O75951 148 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 CYB5R3P00387 301 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 CATR1Q13166 79 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 C10orf128Q5T292 105 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 PARLQ9H300 379 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 PROK2Q9HC23 129 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 FOXI3A8MTJ6 420 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 M0R143 59 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 IGHV2-70P01814 119 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 AMTP48728 403 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 CARFQ8N187 725 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 SIGLECL1Q8N7X8 197 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 SSC4DQ8WTU2 575 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 VAMP8Q9BV40 100 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 ABI3Q9P2A4 366 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 TIMM8AO60220 97 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 IGHV3-48P01763 117 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 GCSAMLQ5JQS6 135 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 DMRTC2Q8IXT2 367 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 RAB40CQ96S21 281 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 GPR35Q9HC97 309 aa11.95□□□□□ -0.5
TUBGCP3-201ENST00000261965 TMEM50AO95807 157 aa11.94□□□□□ -0.5
TUBGCP3-201ENST00000261965 CDC34P49427 236 aaPredicted RBP11.94□□□□□ -0.5
TUBGCP3-201ENST00000261965 REC114Q7Z4M0 266 aa11.94□□□□□ -0.5
TUBGCP3-201ENST00000261965 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
TUBGCP3-201ENST00000261965 SAP25Q8TEE9 199 aa11.94□□□□□ -0.5
TUBGCP3-201ENST00000261965 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms