RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 TMEM11P17152 192 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 IER2Q9BTL4 223 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 OR2J1Q9GZK6 312 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 TRBV6-7A0A0A0MS04 114 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 K7N7A8 449 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 OR10J4P0C629 311 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 AMTP48728 403 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 CDC34P49427 236 aaPredicted RBP8.65□□□□□ -1.03
PALB2-201ENST00000261584 RAC3P60763 192 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.03
PALB2-201ENST00000261584 TFF3Q07654 80 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 FAM27BQ5VT28 67 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 CPEB3Q8NE35 698 aaKnown RBP8.65□□□□□ -1.03
PALB2-201ENST00000261584 RAB24Q969Q5 203 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 ACY3Q96HD9 319 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 C14orf144Q96I85 54 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 UHRF2Q96PU4 802 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 HIST1H2BLQ99880 126 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 HSPB9Q9BQS6 159 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 WNT5BQ9H1J7 359 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 OR2W1Q9Y3N9 320 aa8.65□□□□□ -1.03
PALB2-201ENST00000261584 IGHV3-21A0A0B4J1V1 117 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 LRP5LA4QPB2 252 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 A8MXE2 369 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 LILRA1O75019 489 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 SRSF10O75494 262 aaKnown RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 SRFP11831 508 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 PRSS8Q16651 343 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 OR1P1Q8NH06 330 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 MAFAQ8NHW3 353 aaPredicted RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 PITPNC1Q9UKF7 332 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 SPTBN5Q9NRC6 3674 aaKnown RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 IGHV3OR15-7A0A075B7D8 119 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 RPL36A-HNRNPH2H7BZ11 118 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 LAMTOR5O43504 91 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 GATCO43716 136 aaKnown RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 PLAUP00749 431 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 GCH1P30793 250 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 CCL11P51671 97 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 NUFIP2Q7Z417 695 aaKnown RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 ZNF573Q86YE8 665 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 DMRTC2Q8IXT2 367 aaPredicted RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 FGFRL1Q8N441 504 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 SIGLECL1Q8N7X8 197 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 RAB40CQ96S21 281 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 SIRT7Q9NRC8 400 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 NAT8Q9UHE5 227 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 A0A0U1RQV5 110 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 CBY3A6NI87 242 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 PAX6P26367 422 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 S100A7P31151 101 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 GPR12P47775 334 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 GNG3P63215 75 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 CLDND2Q8NHS1 167 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 DTD1Q8TEA8 209 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 GALMQ96C23 342 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 VAMP8Q9BV40 100 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 DUSP23Q9BVJ7 150 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 LIN7CQ9NUP9 197 aaKnown RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 TICRRQ7Z2Z1 1910 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 CYB5R3P00387 301 aaPredicted RBP8.64□□□□□ -1.03
PALB2-201ENST00000261584 OR4A8P0C604 315 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 SLC10A1Q14973 349 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 DCAF12Q5T6F0 453 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 CMTM2Q8TAZ6 248 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 ABHD5Q8WTS1 349 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
PALB2-201ENST00000261584 H3BTX0 84 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 SPINT2O43291 252 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 LTBRP36941 435 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 ATP5G3P48201 142 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 Q6ZRM9 215 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 NEIL1Q96FI4 390 aaPredicted RBP8.63□□□□□ -1.03
PALB2-201ENST00000261584 CTDSP1Q9GZU7 261 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 TMEM9BQ9NQ34 198 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 SH2D1BO14796 132 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 ENSAO43768 121 aaKnown RBP8.63□□□□□ -1.03
PALB2-201ENST00000261584 C1QTNF9P0C862 333 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 RAB4AP20338 218 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 ATP1A1-AS1Q5TC04 95 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 MIC13Q5XKP0 118 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 HIST3H2BBQ8N257 126 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 APOBEC3DQ96AK3 386 aaPredicted RBP8.63□□□□□ -1.03
PALB2-201ENST00000261584 PNRC2Q9NPJ4 139 aaKnown RBP8.63□□□□□ -1.03
PALB2-201ENST00000261584 TUBD1Q9UJT1 453 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 CHCHD2Q9Y6H1 151 aaPredicted RBP8.63□□□□□ -1.03
PALB2-201ENST00000261584 C17orf112F2Z3M2 114 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 RAMP3O60896 148 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 HIST1H1BP16401 226 aaKnown RBP8.63□□□□□ -1.03
PALB2-201ENST00000261584 EXT1Q16394 746 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 TMEM211Q6ICI0 200 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 ABHD12Q8N2K0 398 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 OR4P4Q8NGL7 312 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 TAF15Q92804 592 aaKnown RBP eCLIP8.63□□□□□ -1.03
PALB2-201ENST00000261584 TAAR9Q96RI9 348 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 SRD5A3Q9H8P0 318 aa8.63□□□□□ -1.03
PALB2-201ENST00000261584 CRIM1Q9NZV1 1036 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms