RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZNF506Q5JVG8 444 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 MYPOPQ86VE0 399 aaPredicted RBP16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 CYB561D1Q8N8Q1 229 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 ASB5Q8WWX0 329 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 GPR84Q9NQS5 396 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 NKX6-3A6NJ46 265 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 GPR137BO60478 399 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 CELA3BP08861 270 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 RANP62826 216 aaKnown RBP16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 CLEC2AQ6UVW9 174 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 COMMD2Q86X83 199 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 C11orf42Q8N5U0 333 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 C20orf144Q9BQM9 153 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 RTBDNQ9BSG5 229 aaPredicted RBP16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 ELOVL5Q9NYP7 299 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 A0A0U1RQV5 110 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 AGFG2O95081 481 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 IGKV3-15P01624 115 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 IGLV3-1P01715 115 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 SELEP16581 610 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 ALDH3B1P43353 468 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 ASPHD2Q6ICH7 369 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 OR10A2Q9H208 303 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 PRR13Q9NZ81 148 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 CGGBP1Q9UFW8 167 aaPredicted RBP16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 NAGKQ9UJ70 344 aa16.07■□□□□ 0.16
COL4A3BP-201ENST00000261415 A0A1B0GU03 582 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 A0A1B0GV50 99 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 IFNA21P01568 189 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 TLE1Q04724 770 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 TIMM23BQ5SRD1 257 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 TMEM182Q6ZP80 229 aaPredicted RBP16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 TGIF2LYQ8IUE0 185 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 BBC3Q96PG8 261 aaPredicted RBP16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 C1QTNF5Q9BXJ0 243 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 SLC25A15Q9Y619 301 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 CCL1P22362 96 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 VAMP2P63027 116 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 ICAM4Q14773 271 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 MAJINQ3KP22 176 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 COLCA1Q6ZS62 124 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 FGGYQ96C11 551 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 RBMXL1Q96E39 390 aaKnown RBP16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 LYZL4Q96KX0 146 aa16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 LSM5Q9Y4Y9 91 aaKnown RBP16.06■□□□□ 0.16
COL4A3BP-201ENST00000261415 WIPF3A6NGB9 483 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 LMX1BO60663 402 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 RBMXP38159 391 aaKnown RBP16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 RAB7AP51149 207 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 ADORA2A-AS1P86434 159 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 TBC1D28Q2M2D7 210 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 OR2AE1Q8NHA4 323 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 FAM71F1Q96KD3 344 aaPredicted RBP16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 WFDC1Q9HC57 220 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 TAS2R4Q9NYW5 299 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 CHRNB4P30926 498 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 UQCRFS1P47985 274 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 SPSB3Q6PJ21 355 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 DOK3Q7L591 496 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 SH3BGRL3Q9H299 93 aa16.05■□□□□ 0.16
COL4A3BP-201ENST00000261415 HCFC1P51610 2035 aa16.04■□□□□ 0.16
COL4A3BP-201ENST00000261415 PTTG1IPP53801 180 aa16.04■□□□□ 0.16
COL4A3BP-201ENST00000261415 CCL20P78556 96 aa16.04■□□□□ 0.16
COL4A3BP-201ENST00000261415 ATP6V1FQ16864 119 aa16.04■□□□□ 0.16
COL4A3BP-201ENST00000261415 PRR7Q8TB68 274 aa16.04■□□□□ 0.16
COL4A3BP-201ENST00000261415 ANAPC10Q9UM13 185 aa16.04■□□□□ 0.16
COL4A3BP-201ENST00000261415 FAM230AA0A1W2PPH8 454 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 PRSS47A8MTI9 375 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 PPBPP02775 128 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 GNLYP22749 145 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 IGFBP7Q16270 282 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 ZNF66Q6ZN08 573 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 GBGT1Q8N5D6 347 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 ORAOV1Q8WV07 137 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 EMG1Q92979 244 aaKnown RBP16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 APOBEC3DQ96AK3 386 aaPredicted RBP16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 REEP6Q96HR9 211 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 PYGO2Q9BRQ0 406 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 ADGRG4Q8IZF6 3080 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 C16orf97H3BN30 126 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 IGLV1-44P01699 117 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 WNT5AP41221 380 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 ELLP55199 621 aaPredicted RBP16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 PRDX4Q13162 271 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 ACOT6Q3I5F7 207 aaPredicted RBP16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 TMEM170AQ8WVE7 144 aa16.03■□□□□ 0.16
COL4A3BP-201ENST00000261415 DHRS3O75911 302 aa16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 GSTP1P09211 210 aaKnown RBP16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 ASCL1P50553 236 aa16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 FAM169BQ8N8A8 192 aa16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 ADAT3Q96EY9 351 aaPredicted RBP16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 TP53RKQ96S44 253 aa16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 AURKAIP1Q9NWT8 199 aaPredicted RBP16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 ZNF391Q9UJN7 358 aa16.02■□□□□ 0.16
COL4A3BP-201ENST00000261415 CADP27708 2225 aa16.02■□□□□ 0.15
COL4A3BP-201ENST00000261415 XRCC2O43543 280 aa16.02■□□□□ 0.15
COL4A3BP-201ENST00000261415 NGFP01138 241 aa16.02■□□□□ 0.15
COL4A3BP-201ENST00000261415 HBE1P02100 147 aa16.02■□□□□ 0.15
COL4A3BP-201ENST00000261415 CECR9P0C854 216 aa16.02■□□□□ 0.15
COL4A3BP-201ENST00000261415 Q6ZSR3 168 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms