RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 KIR2DS1A0A191URI9 304 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 SH2D1BO14796 132 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 HAND1O96004 215 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 GAPDHP04406 335 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 PSG2P11465 335 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 KIR2DS4P43632 304 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 KIR2DS1Q14954 304 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 STX12Q86Y82 276 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 KMT2EQ8IZD2 1858 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 MEGF10Q96KG7 1140 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 GPR61Q9BZJ8 451 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
TRAFD1-201ENST00000257604 SPG11Q96JI7 2443 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 IFITM10A6NMD0 228 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 TAGLN2P37802 199 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 PMELP40967 661 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 SURF2Q15527 256 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 Q6ZR03 302 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 OR52L2PQ8NGH6 319 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 SUCNR1Q9BXA5 334 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 POLDIP2Q9Y2S7 368 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 CHD3Q12873 2000 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 YLPM1P49750 1951 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 IGHV2OR16-5A0A0B4J2B6 119 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 CXCL1P09341 107 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 PCP4P48539 62 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 HMGN3Q15651 99 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 MPV17LQ2QL34 196 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 SPINK9Q5DT21 86 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 POMT1Q9Y6A1 747 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 BSNQ9UPA5 3926 aa12.35□□□□□ -0.43
TRAFD1-201ENST00000257604 E5RGE8 158 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 RRP8O43159 456 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 CRYAAP02489 173 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 IAPPP10997 89 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 RAC2P15153 192 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 SSTR5P35346 364 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 GLIPR1P48060 266 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 VAMP2P63027 116 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 GNMTQ14749 295 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 TUBD1Q9UJT1 453 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 FAM215AQ9Y5M1 114 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 AHRRA9YTQ3 701 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 NAPSAO96009 420 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 ZNF816Q0VGE8 651 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 IL24Q13007 206 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 MSMPQ1L6U9 139 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 OR2G3Q8NGZ4 309 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 GLRX2Q9NS18 164 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 PTPRBP23467 1997 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 LRP5LA4QPB2 252 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 OR5H1A6NKK0 313 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 CYB5BO43169 146 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 IFNA17P01571 189 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 PAX6P26367 422 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 MOGAT3Q86VF5 341 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 LEAP2Q969E1 77 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 MSI2Q96DH6 328 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 DOK5Q9P104 306 aa12.34□□□□□ -0.43
TRAFD1-201ENST00000257604 ASH1LQ9NR48 2969 aaKnown RBP12.33□□□□□ -0.43
TRAFD1-201ENST00000257604 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 NKX2-1P43699 371 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 P2RY1P47900 373 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 UBE2KP61086 200 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 SLC25A24Q6NUK1 477 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 ZNRF1Q8ND25 227 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 OR8G5Q8NG78 346 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 PLEKHA2Q9HB19 425 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 CA11O75493 328 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 TRGC2P03986 189 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 ABHD14BQ96IU4 210 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 OPA3Q9H6K4 179 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 TAAR3PQ9P1P4 343 aa12.33□□□□□ -0.44
TRAFD1-201ENST00000257604 KRASP01116 189 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 MMP9P14780 707 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 S100A2P29034 98 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 DEFA6Q01524 100 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 BEND4Q6ZU67 534 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 PBDC1Q9BVG4 233 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 KCNIP1Q9NZI2 227 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 WNK2Q9Y3S1 2297 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 FABP4P15090 132 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 NDUFB7P17568 137 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms