RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 CRYM-AS1A6NIL9 109 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 H0Y8G0 127 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 SYNGR3O43761 229 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 CLEC3BP05452 202 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 ID4P47928 161 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 KHDC3LQ587J8 217 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 MS4A10Q96PG2 267 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 GPR132Q9UNW8 380 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 ARL2-SNX15V9GYD0 113 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 ZDBF2Q9HCK1 2354 aa13.58□□□□□ -0.23
SIN3B-201ENST00000248054 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 MEX3AA1L020 520 aaKnown RBP13.58□□□□□ -0.24
SIN3B-201ENST00000248054 COLCA2A8K830 154 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 PITX3O75364 302 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 A0A1W2PN81 502 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 C3orf80F5H4A9 247 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 TCF21O43680 179 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 CHRNA7P36544 502 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 TOMM20LQ6UXN7 152 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 MRPL24Q96A35 216 aaKnown RBP13.58□□□□□ -0.24
SIN3B-201ENST00000248054 OPN3Q9H1Y3 402 aaPredicted RBP13.58□□□□□ -0.24
SIN3B-201ENST00000248054 PDE6DO43924 150 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 TRGC2P03986 189 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 SULT1A2P50226 295 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 PAX5Q02548 391 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 NAT8BQ9UHF3 227 aa13.58□□□□□ -0.24
SIN3B-201ENST00000248054 ATP1A1-AS1Q5TC04 95 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 ADAD2Q8NCV1 583 aaKnown RBP13.57□□□□□ -0.24
SIN3B-201ENST00000248054 AAMDCQ9H7C9 122 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 ZDHHC8Q9ULC8 765 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 GBF1Q92538 1859 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 MST1P26927 711 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 TMEM230Q96A57 120 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 RTN4RQ9BZR6 473 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 LIPGQ9Y5X9 500 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 IGKV1D-43A0A0B4J1Z2 117 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 MGST3O14880 152 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 CHST1O43916 411 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 FA2HQ7L5A8 372 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 ADAMTS17Q8TE56 1095 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 BCL2L2Q92843 193 aaPredicted RBP13.57□□□□□ -0.24
SIN3B-201ENST00000248054 ACY3Q96HD9 319 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 CCL28Q9NRJ3 127 aa13.57□□□□□ -0.24
SIN3B-201ENST00000248054 IGFBP3P17936 291 aaPredicted RBP13.56□□□□□ -0.24
SIN3B-201ENST00000248054 ASCL1P50553 236 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 DLK1P80370 383 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 OR2T6Q8NHC8 308 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 GTF3AQ92664 365 aaKnown RBP13.56□□□□□ -0.24
SIN3B-201ENST00000248054 TECRQ9NZ01 308 aaKnown RBP13.56□□□□□ -0.24
SIN3B-201ENST00000248054 CEACAM3P40198 252 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 MRPS11P82912 194 aaKnown RBP13.56□□□□□ -0.24
SIN3B-201ENST00000248054 LRP11Q86VZ4 500 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 GNB4Q9HAV0 340 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 FBLN5Q9UBX5 448 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 H3BQ15 152 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 M0QZK8 103 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 GGCTO75223 188 aaKnown RBP13.56□□□□□ -0.24
SIN3B-201ENST00000248054 VAMP3Q15836 100 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 ELOVL1Q9BW60 279 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 CD8AP01732 235 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 MELTFP08582 738 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 SERF2P84101 59 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 OR4F17Q8NGA8 305 aa13.56□□□□□ -0.24
SIN3B-201ENST00000248054 FCN1O00602 326 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 HOXA5P20719 270 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 H1FOOQ8IZA3 346 aaPredicted RBP13.55□□□□□ -0.24
SIN3B-201ENST00000248054 BMPERQ8N8U9 685 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 TM2D1Q9BX74 207 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 hCG_38984A0A1B0GV85 526 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 SERTM2A0A1B0GWG4 89 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 RNF222A6NCQ9 220 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 PRDX2P32119 198 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 PTTG1IPP53801 180 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 LRFN3Q9BTN0 628 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 C1QTNF5Q9BXJ0 243 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 MSL2Q9HCI7 577 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 ELOVL5Q9NYP7 299 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 IL36GQ9NZH8 169 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 PITPNC1Q9UKF7 332 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 DEFB108AA8MXU0 73 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 LHX2P50458 406 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 PRR27Q6MZM9 219 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 MARS2Q96GW9 593 aaKnown RBP13.55□□□□□ -0.24
SIN3B-201ENST00000248054 A0A0G2JMM0 328 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 CTXND1A0A1B0GTU2 59 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 A0A1W2PP11 408 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 A0A1W2PPB8 328 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 A0A1W2PRS3 328 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 LRRC3CA6NJW4 275 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 KIR3DP1A8MWS1 328 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
SIN3B-201ENST00000248054 GDF9O60383 454 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 FOLR2P14207 255 aa13.55□□□□□ -0.24
SIN3B-201ENST00000248054 OR5I1Q13606 314 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms