RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ZNF319Q9P2F9 582 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 TUBD1Q9UJT1 453 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 MPC1Q9Y5U8 109 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 PLCE1Q9P212 2302 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 A0A0G2JMM0 328 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 A0A1W2PPB8 328 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 A0A1W2PRS3 328 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 KIR3DP1A8MWS1 328 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 SCTP09683 121 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 TPPP2P59282 170 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 CCL8P80075 99 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 AESQ08117 197 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 IZUMO4Q1ZYL8 232 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 DNM1P46Q6ZS02 220 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 SIGLEC12Q96PQ1 595 aa7.98□□□□□ -1.13
COL21A1-201ENST00000244728 IGHV3OR15-7A0A075B7D8 119 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 IGKV1-9A0A0C4DH69 117 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 DUXBA0A1W2PPF3 345 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 NPIPB7O75200 414 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 PSG2P11465 335 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 RBM11P57052 281 aaKnown RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 CCL20P78556 96 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 TMEM108Q6UXF1 575 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 TIPARPQ7Z3E1 657 aaKnown RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 MYPOPQ86VE0 399 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 FBLN5Q9UBX5 448 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 DENND4CQ5VZ89 1909 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 GTF3C1Q12789 2109 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 SCGB2A1O75556 95 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 TNFRSF1AP19438 455 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 CTAG1AP78358 180 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 ASPHD2Q6ICH7 369 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 MOB3BQ86TA1 216 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 LURAP1LQ8IV03 231 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 KDF1Q8NAX2 398 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 ZNF439Q8NDP4 499 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 OR10S1Q8NGN2 331 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 OR1P1Q8NH06 330 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 PCGF1Q9BSM1 259 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 WFDC1Q9HC57 220 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 SPINK4O60575 86 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 PAGE4O60829 102 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 TOX4O94842 621 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 IGLV3-19P01714 112 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 COX7A1P24310 79 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 Q8IYB0 196 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 WFIKKN1Q96NZ8 548 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 SLC31A2O15432 143 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 IL3RAP26951 378 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 CCKARP32238 428 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 HEPN1Q6WQI6 88 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 LHFPL1Q86WI0 220 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 TGIF2LXQ8IUE1 241 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 GALNT14Q96FL9 552 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 NOL4LQ96MY1 436 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 CIB3Q96Q77 187 aaPredicted RBP7.97□□□□□ -1.13
COL21A1-201ENST00000244728 MTCH1Q9NZJ7 389 aa7.97□□□□□ -1.13
COL21A1-201ENST00000244728 RPL36A-HNRNPH2H7BZ11 118 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 K7ESF4 209 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 SYNGR1O43759 233 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BKO60814 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BJP06899 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 ZNF17P17021 662 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BOP23527 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BBP33778 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BDP58876 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BCP62807 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 GNB2P62879 340 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 RTL8BQ17RB0 113 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 PYY3Q5JQD4 70 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-201ENST00000244728 SLC23A3Q6PIS1 610 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 NUFIP2Q7Z417 695 aaKnown RBP7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.13
COL21A1-201ENST00000244728 OPN3Q9H1Y3 402 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-201ENST00000244728 CHCHD2Q9Y6H1 151 aaPredicted RBP7.96□□□□□ -1.13
COL21A1-201ENST00000244728 NPIPB13A6NJU9 1138 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 NPIPB4C9JG80 1138 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 NDUFB3O43676 98 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 CA11O75493 328 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 HIST1H1BP16401 226 aaKnown RBP7.96□□□□□ -1.14
COL21A1-201ENST00000244728 CDC34P49427 236 aaPredicted RBP7.96□□□□□ -1.14
COL21A1-201ENST00000244728 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 CPEB3Q8NE35 698 aaKnown RBP7.96□□□□□ -1.14
COL21A1-201ENST00000244728 CMTM2Q8TAZ6 248 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 DDA1Q9BW61 102 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 RPRMQ9NS64 109 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 NCOR2Q9Y618 2525 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 FAM157AC9JC47 383 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 C11orf94C9JXX5 98 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 F2RP25116 425 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 NPBWR2P48146 333 aa7.96□□□□□ -1.14
COL21A1-201ENST00000244728 SUMO1P63165 101 aaKnown RBP7.96□□□□□ -1.14
COL21A1-201ENST00000244728 CYB5R2Q6BCY4 276 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms