RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 A0A087WWC5 75 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF729A6NN14 1252 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-202ENST00000244303 NDUFS6O75380 124 aaKnown RBP12.12□□□□□ -0.47
HIF3A-202ENST00000244303 CD200P41217 278 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 CCL11P51671 97 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 DEFA6Q01524 100 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 PSG7Q13046 419 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF726P1Q15940 193 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF343Q6P1L6 599 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 LILRB2Q8N423 598 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF610Q8N9Z0 462 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 GMPPAQ96IJ6 420 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-202ENST00000244303 DOK5Q9P104 306 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 IQCF6A8MYZ5 107 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 PSPNO60542 156 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 HAND1O96004 215 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 RAC2P15153 192 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 PYY3Q5JQD4 70 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 SSX7Q7RTT5 188 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 MPV17P39210 176 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-202ENST00000244303 HBG1P69891 147 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 HBG2P69892 147 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-202ENST00000244303 ELOBQ15370 118 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-202ENST00000244303 FGFRL1Q8N441 504 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 Q8WTZ3 238 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 PSMG3Q9BT73 122 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-202ENST00000244303 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 RNF150Q9ULK6 438 aa12.11□□□□□ -0.47
HIF3A-202ENST00000244303 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 CYB5BO43169 146 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 CXCL1P09341 107 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 TGFBR3Q03167 851 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 LRRC75BQ2VPJ9 315 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 FAM53AQ6NSI3 398 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-202ENST00000244303 OR1L1Q8NH94 360 aa12.1□□□□□ -0.47
HIF3A-202ENST00000244303 WNT9BO14905 357 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 RAMP3O60896 148 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 OR3A1P47881 315 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 RAB11AP62491 216 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 GABRA6Q16445 453 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF826PQ6ZT77 177 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 SLC35E3Q7Z769 313 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF645Q8N7E2 425 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 FDCSPQ8NFU4 85 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 OR10D4PQ8NGN7 298 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 OR2D2Q9H210 308 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 OBP2BQ9NPH6 170 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 DOCK11Q5JSL3 2073 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 CACNA1DQ01668 2161 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 IFITM10A6NMD0 228 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 RNF212BA8MTL3 300 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 MLNRO43193 412 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 BCL2P10415 239 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 NKX6-1P78426 367 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-202ENST00000244303 PDZD11Q5EBL8 140 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 FAM90A2PQ658T7 463 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 FAM180AQ6UWF9 173 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 OR10G4Q8NGN3 311 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-202ENST00000244303 MBD3L1Q8WWY6 194 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
HIF3A-202ENST00000244303 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
HIF3A-202ENST00000244303 HES4Q9HCC6 221 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 CISD1Q9NZ45 108 aaKnown RBP12.09□□□□□ -0.47
HIF3A-202ENST00000244303 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 PRR14LQ5THK1 2151 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
HIF3A-202ENST00000244303 TGIF2-C20orf24A0A0A6YYL0 155 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 UBE2L5PA0A1B0GUS4 154 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 TMEM30CPA0ZSE6 113 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 TMEM210A6NLX4 147 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 C12orf77C9JDV5 145 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 LY86O95711 162 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 WT1P19544 449 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-202ENST00000244303 SERF2P84101 59 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 FIP1L1Q6UN15 594 aaKnown RBP12.08□□□□□ -0.48
HIF3A-202ENST00000244303 GALMQ96C23 342 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 C5orf30Q96GV9 206 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 RBKSQ9H477 322 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 CLCF1Q9UBD9 225 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 FAM90A26D6RGX4 464 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 TFF1P04155 84 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 G6PCP35575 357 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 GLIPR1P48060 266 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 ELLP55199 621 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-202ENST00000244303 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.48
HIF3A-202ENST00000244303 AESQ08117 197 aa12.08□□□□□ -0.48
HIF3A-202ENST00000244303 SLC38A11Q08AI6 406 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms