RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 BIVMQ86UB2 503 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 TUSC5Q8IXB3 177 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 LRRC3BQ96PB8 259 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 YTHDF2Q9Y5A9 579 aaKnown RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 SMPD2O60906 423 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 C10orf113Q5VZT2 155 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 GMPPAQ96IJ6 420 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 LIPT2A6NK58 231 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 CD300LDQ6UXZ3 194 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 C5orf24Q7Z6I8 188 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 PGLYRP3Q96LB9 341 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 ZNF576Q9H609 170 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 SF3B6Q9Y3B4 125 aaKnown RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 IGHV3OR16-8A0A075B7F1 116 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 TRGV10A0A0A0MS01 117 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 K7ESF4 209 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 DRD3P35462 400 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 SLC17A5Q9NRA2 495 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 CARFQ8N187 725 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 KCNE5Q9UJ90 142 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 IGHV3-23P01764 117 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 KISS1RQ969F8 398 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 SAP30LQ9HAJ7 183 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 LHX9Q9NQ69 397 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 RGPD3A6NKT7 1758 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 RGPD4Q7Z3J3 1758 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 COL11A1P12107 1806 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 PITX3O75364 302 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
RIF1-201ENST00000243326 ZNF519Q8TB69 540 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 NPBWR2P48146 333 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 PMCHL1Q16048 86 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 OR4F17Q8NGA8 305 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 IGKV1-8A0A0C4DH67 115 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 UPK3AO75631 287 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 ADH4P08319 380 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 CD99P14209 185 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 ZNF141Q15928 474 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 OR2J1Q9GZK6 312 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 COA4Q9NYJ1 87 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 IL36GQ9NZH8 169 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 COL18A1P39060 1754 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.36
RIF1-201ENST00000243326 COL8A1P27658 744 aa6.52□□□□□ -1.36
RIF1-201ENST00000243326 HOXC8P31273 242 aa6.52□□□□□ -1.36
RIF1-201ENST00000243326 FAM222BQ8WU58 562 aa6.52□□□□□ -1.36
RIF1-201ENST00000243326 NDUFB3O43676 98 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 CCL4P13236 92 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 CD82P27701 267 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 BDP1A6H8Y1 2624 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 ARF6P62330 175 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 TM4SF19Q96DZ7 209 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 PPIHO43447 177 aaKnown RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 PLP1P60201 277 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 FOXO1Q12778 655 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 FER1L6-AS2Q96M78 137 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 EGLN1Q9GZT9 426 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 TBL2Q9Y4P3 447 aaKnown RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 TRAV14DV4A0A0A6YYC5 116 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 C7orf71A4D174 169 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 VAMP5O95183 116 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 ISG15P05161 165 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 FGF2P09038 288 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 ARL14EPLP0DKL9 152 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 DSCR4P56555 118 aaPredicted RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 HCP5Q6MZN7 132 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 OR2Y1Q8NGV0 311 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 BCL2P10415 239 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 SOX8P57073 446 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 HSPB8Q9UJY1 196 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 HIST1H1BP16401 226 aaKnown RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 ZNF766Q5HY98 468 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 HDGFL3Q9Y3E1 203 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 TMPRSS2O15393 492 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 AAMDCQ9H7C9 122 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 GDF9O60383 454 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 HOGA1Q86XE5 327 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 C9orf40Q8IXQ3 194 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 ZADH2Q8N4Q0 377 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 LHX8Q68G74 356 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 WDR34Q96EX3 536 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 ANGPTL4Q9BY76 406 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 OR51B2Q9Y5P1 312 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 HES7Q9BYE0 225 aa6.52□□□□□ -1.37
RIF1-201ENST00000243326 ZNF71Q9NQZ8 489 aaPredicted RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 MRPS18AQ9NVS2 196 aaKnown RBP6.52□□□□□ -1.37
RIF1-201ENST00000243326 CYB5R3P00387 301 aaPredicted RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 ANAPC16Q96DE5 110 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 CDCA3Q99618 268 aaPredicted RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 MRPS11P82912 194 aaKnown RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 TNFAIP6P98066 277 aaPredicted RBP6.51□□□□□ -1.37
RIF1-201ENST00000243326 ZDHHC16Q969W1 377 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 ZNF708P17019 499 aa6.51□□□□□ -1.37
RIF1-201ENST00000243326 C1QL2Q7Z5L3 287 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms