RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 MRPL33O75394 65 aaKnown RBP13.12□□□□□ -0.31
DDX55-201ENST00000238146 TSPAN7P41732 249 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
DDX55-201ENST00000238146 GNB2P62879 340 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 OR5P3Q8WZ94 311 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 LIN7CQ9NUP9 197 aaKnown RBP13.12□□□□□ -0.31
DDX55-201ENST00000238146 RBM7Q9Y580 266 aaKnown RBP13.12□□□□□ -0.31
DDX55-201ENST00000238146 ARHGAP21Q5T5U3 1957 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 CTXND1A0A1B0GTU2 59 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 EREGO14944 169 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 WDR1O75083 606 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 SS18L1O75177 396 aaPredicted RBP13.12□□□□□ -0.31
DDX55-201ENST00000238146 CLDN1O95832 211 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 HOXA6P31267 233 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 HLA-BQ31612 363 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 FGFRL1Q8N441 504 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 OR2Y1Q8NGV0 311 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 TMEM45BQ96B21 275 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 KCNS2Q9ULS6 477 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 WASF3Q9UPY6 502 aa13.12□□□□□ -0.31
DDX55-201ENST00000238146 GYPAP02724 150 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 OR4A8P0C604 315 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
DDX55-201ENST00000238146 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 DEPPQ9NTK1 212 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 TNRC6BQ9UPQ9 1833 aaKnown RBP13.11□□□□□ -0.31
DDX55-201ENST00000238146 TYMSP04818 313 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 ACOT6Q3I5F7 207 aaPredicted RBP13.11□□□□□ -0.31
DDX55-201ENST00000238146 OR10G9Q8NGN4 311 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 OR10G7Q8NGN6 311 aa13.11□□□□□ -0.31
DDX55-201ENST00000238146 MRPL37Q9BZE1 423 aaKnown RBP13.11□□□□□ -0.31
DDX55-201ENST00000238146 FAM90A26D6RGX4 464 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 RHBDL1O75783 438 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 CCL4P13236 92 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 LBX1P52954 281 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 PAX5Q02548 391 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 ZNF573Q86YE8 665 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
DDX55-201ENST00000238146 PI4KAP42356 2102 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 A0A1W2PR80 420 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
DDX55-201ENST00000238146 IGFBP7Q16270 282 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 Q6P435 159 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 MRPL41Q8IXM3 137 aaKnown RBP13.1□□□□□ -0.31
DDX55-201ENST00000238146 CISD2Q8N5K1 135 aaKnown RBP13.1□□□□□ -0.31
DDX55-201ENST00000238146 DRAM1Q8N682 238 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 MANBALQ9NQG1 85 aa13.1□□□□□ -0.31
DDX55-201ENST00000238146 SRP14P37108 136 aaKnown RBP13.09□□□□□ -0.31
DDX55-201ENST00000238146 GFRA1P56159 465 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 RAB4BP61018 213 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 UBE2ZQ9H832 354 aaPredicted RBP13.09□□□□□ -0.31
DDX55-201ENST00000238146 PINLYPA6NC86 204 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 PAGE4O60829 102 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 COX5BP10606 129 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 GDF1P27539 372 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 GNG3P63215 75 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 PHF7Q9BWX1 381 aaPredicted RBP13.09□□□□□ -0.31
DDX55-201ENST00000238146 LINC00470Q9BZP3 86 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 PLA2G3Q9NZ20 509 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 HSPB7Q9UBY9 170 aa13.09□□□□□ -0.31
DDX55-201ENST00000238146 DIDO1Q9BTC0 2240 aaKnown RBP13.09□□□□□ -0.31
DDX55-201ENST00000238146 IFNL4K9M1U5 179 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 NPPCP23582 126 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 CCKARP32238 428 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 IQCJQ1A5X6 159 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 GBGT1Q8N5D6 347 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 NEIL1Q96FI4 390 aaPredicted RBP13.08□□□□□ -0.31
DDX55-201ENST00000238146 POM121L2Q96KW2 1035 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 WFIKKN1Q96NZ8 548 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 TMEM147Q9BVK8 224 aa13.08□□□□□ -0.31
DDX55-201ENST00000238146 IGKV3D-15A0A087WSY6 115 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 ANKRD30BLA7E2S9 258 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 VENTXO95231 258 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 MBP02144 154 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
DDX55-201ENST00000238146 PMP22Q01453 160 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 Q0VFX4 171 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 TEX38Q6PEX7 206 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 OR5T1Q8NG75 326 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 ATG101Q9BSB4 218 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 SNHG12Q9BXW3 62 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 TRAPPC2LQ9UL33 140 aa13.08□□□□□ -0.32
DDX55-201ENST00000238146 PMS2P5A8MQ11 134 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 C1QTNF9BB2RNN3 333 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 DEFA4P12838 97 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 CHRNA7P36544 502 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 ATP6V1FQ16864 119 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 ZNF497Q6ZNH5 498 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 MOB1BQ7L9L4 216 aa13.07□□□□□ -0.32
DDX55-201ENST00000238146 TUSC5Q8IXB3 177 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms