RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 LRRC75BQ2VPJ9 315 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 ACSF3Q4G176 576 aaPredicted RBP13.13□□□□□ -0.31
CTSD-201ENST00000236671 ZNF497Q6ZNH5 498 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 MOB1BQ7L9L4 216 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 RCC1LQ96I51 464 aaKnown RBP13.13□□□□□ -0.31
CTSD-201ENST00000236671 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 PRSS50Q9UI38 385 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 RNF150Q9ULK6 438 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 RELNP78509 3460 aa13.13□□□□□ -0.31
CTSD-201ENST00000236671 A0A1W2PR80 420 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 TRGC2P03986 189 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 RND2P52198 227 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
CTSD-201ENST00000236671 PNRC1Q12796 327 aaPredicted RBP13.12□□□□□ -0.31
CTSD-201ENST00000236671 C3AR1Q16581 482 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 ABHD17BQ5VST6 288 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 WDR86Q86TI4 376 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 OR13D1Q8NGV5 346 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 LIN7CQ9NUP9 197 aaKnown RBP13.12□□□□□ -0.31
CTSD-201ENST00000236671 GAR1Q9NY12 217 aaKnown RBP13.12□□□□□ -0.31
CTSD-201ENST00000236671 TREM2Q9NZC2 230 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 DMRT1Q9Y5R6 373 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 TRBV23-1A0A0A0MS06 115 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 SIRPB1O00241 398 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 IL18BPO95998 194 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 CLN3Q13286 438 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 SPATA46Q5T0L3 261 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 ATP1A1-AS1Q5TC04 95 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 PRR18Q8N4B5 295 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 ZMAT5Q9UDW3 170 aaKnown RBP13.12□□□□□ -0.31
CTSD-201ENST00000236671 KCNS2Q9ULS6 477 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 ZFYVE26Q68DK2 2539 aa13.12□□□□□ -0.31
CTSD-201ENST00000236671 ATRXP46100 2492 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 OR2H2O95918 312 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 CYB5R3P00387 301 aaPredicted RBP13.11□□□□□ -0.31
CTSD-201ENST00000236671 S100A2P29034 98 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 HBG1P69891 147 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 HBG2P69892 147 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 SERF2P84101 59 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 C1orf87Q8N0U7 546 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 UBALD1Q8TB05 177 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 ZPBPQ9BS86 351 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
CTSD-201ENST00000236671 GP6Q9HCN6 339 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 TMEM242Q9NWH2 141 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 PLA2G3Q9NZ20 509 aa13.11□□□□□ -0.31
CTSD-201ENST00000236671 ZNF16P17020 682 aaPredicted RBP13.1□□□□□ -0.31
CTSD-201ENST00000236671 ESPL1Q14674 2120 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 TMEM41BQ5BJD5 291 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 OR1K1Q8NGR3 316 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 FAM210BQ96KR6 192 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 P2RX4Q99571 388 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
CTSD-201ENST00000236671 SDF2L1Q9HCN8 221 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 RAXQ9Y2V3 346 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 WDR1O75083 606 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 GFI1BQ5VTD9 330 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 CDPF1Q6NVV7 123 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 MDP1Q86V88 176 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 OR4C12Q96R67 309 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 TRAPPC2LQ9UL33 140 aa13.1□□□□□ -0.31
CTSD-201ENST00000236671 CLDN34H7C241 214 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 SOD3P08294 240 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 NKX6-1P78426 367 aaPredicted RBP13.09□□□□□ -0.31
CTSD-201ENST00000236671 OR2B11Q5JQS5 317 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 MCEMP1Q8IX19 187 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 HIST3H2BBQ8N257 126 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 DRAM1Q8N682 238 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 SCCPDHQ8NBX0 429 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 BCL2L2Q92843 193 aaPredicted RBP13.09□□□□□ -0.31
CTSD-201ENST00000236671 RTL8AQ9BWD3 113 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 C12orf49Q9H741 205 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 MBNL3Q9NUK0 354 aaKnown RBP13.09□□□□□ -0.31
CTSD-201ENST00000236671 VAX2Q9UIW0 290 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
CTSD-201ENST00000236671 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 MAP1LC3B2A6NCE7 125 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 PHOX2AO14813 284 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 ELLP55199 621 aaPredicted RBP13.09□□□□□ -0.31
CTSD-201ENST00000236671 PLGLB1Q02325 96 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 UNQ6494/PRO21346Q6UXR6 183 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 LINC00696Q6ZRV3 163 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 FRZBQ92765 325 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
CTSD-201ENST00000236671 SSX3Q99909 188 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 MAP1LC3BQ9GZQ8 125 aa13.09□□□□□ -0.31
CTSD-201ENST00000236671 MED12LQ86YW9 2145 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 UBE2L5PA0A1B0GUS4 154 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 CEBPZOSA8MTT3 80 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 FAM90A26D6RGX4 464 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 KLK10O43240 276 aa13.08□□□□□ -0.32
CTSD-201ENST00000236671 TRGC1P0CF51 173 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms