RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 TGIF2-C20orf24A0A0A6YYL0 155 aa13.72□□□□□ -0.21
LTBR-201ENST00000228918 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
LTBR-201ENST00000228918 FGF8P55075 233 aaPredicted RBP13.72□□□□□ -0.21
LTBR-201ENST00000228918 ERVS71-1P61550 626 aa13.72□□□□□ -0.21
LTBR-201ENST00000228918 KIAA2026Q5HYC2 2103 aa13.72□□□□□ -0.21
LTBR-201ENST00000228918 REC114Q7Z4M0 266 aa13.72□□□□□ -0.21
LTBR-201ENST00000228918 DMRTC2Q8IXT2 367 aaPredicted RBP13.72□□□□□ -0.21
LTBR-201ENST00000228918 DOK5Q9P104 306 aa13.72□□□□□ -0.21
LTBR-201ENST00000228918 RNF212BA8MTL3 300 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 SH2D1BO14796 132 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 SLC31A2O15432 143 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 PNRC1Q12796 327 aaPredicted RBP13.71□□□□□ -0.21
LTBR-201ENST00000228918 ALKBH6Q3KRA9 238 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 TMEM41BQ5BJD5 291 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 SPANXN5Q5MJ07 72 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 CA5BP1Q8WTZ4 195 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 OR4C12Q96R67 309 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 CD46P15529 392 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 NDUFA6P56556 154 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 FGFRL1Q8N441 504 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 CDH20Q9HBT6 801 aa13.71□□□□□ -0.21
LTBR-201ENST00000228918 TRGV5A0A0B4J1U4 118 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 IDH3GP51553 393 aaPredicted RBP13.7□□□□□ -0.22
LTBR-201ENST00000228918 TAS2R60P59551 318 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 MRPL49Q13405 166 aaKnown RBP13.7□□□□□ -0.22
LTBR-201ENST00000228918 GABRA6Q16445 453 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 RNFT1Q5M7Z0 435 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 TMEM14EPQ6UXP3 125 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 SLC25A40Q8TBP6 338 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 P2RX4Q99571 388 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 KNTC1P50748 2209 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 GTF3C1Q12789 2109 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 IGHV3-64DA0A0J9YX35 117 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 IQCF6A8MYZ5 107 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 CYB5BO43169 146 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 HAND1O96004 215 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 SLC38A11Q08AI6 406 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 ZNF766Q5HY98 468 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 ZNF645Q8N7E2 425 aa13.7□□□□□ -0.22
LTBR-201ENST00000228918 TAF15Q92804 592 aaKnown RBP eCLIP13.7□□□□□ -0.22
LTBR-201ENST00000228918 PINX1Q96BK5 328 aaKnown RBP13.7□□□□□ -0.22
LTBR-201ENST00000228918 UBE2L5PA0A1B0GUS4 154 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 CD59P13987 128 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 RAC2P15153 192 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 CEBPDP49716 269 aaPredicted RBP13.69□□□□□ -0.22
LTBR-201ENST00000228918 RND2P52198 227 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 ELLP55199 621 aaPredicted RBP13.69□□□□□ -0.22
LTBR-201ENST00000228918 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 OR10D4PQ8NGN7 298 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 MEGF10Q96KG7 1140 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HES4Q9HCC6 221 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 TMEM242Q9NWH2 141 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 DIDO1Q9BTC0 2240 aaKnown RBP13.69□□□□□ -0.22
LTBR-201ENST00000228918 TMEM210A6NLX4 147 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 PSPNO60542 156 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BKO60814 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 CYB5R3P00387 301 aaPredicted RBP13.69□□□□□ -0.22
LTBR-201ENST00000228918 IFNA10P01566 189 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BJP06899 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 SELEP16581 610 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BOP23527 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BBP33778 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BDP58876 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 CD81P60033 236 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BCP62807 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST2H2BEQ16778 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.69□□□□□ -0.22
LTBR-201ENST00000228918 MRGPRGQ86SM5 289 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 OR13D1Q8NGV5 346 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 OR1L1Q8NH94 360 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BHQ93079 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 GMPPAQ96IJ6 420 aaPredicted RBP13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BNQ99877 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HIST1H2BMQ99879 126 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 RBKSQ9H477 322 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 TIMM9Q9Y5J7 89 aa13.69□□□□□ -0.22
LTBR-201ENST00000228918 TMEM30CPA0ZSE6 113 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 RAMP3O60896 148 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 CLDN1O95832 211 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 GRPP07492 148 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 P0C879 139 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 NDUFB7P17568 137 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 IGHV1-2P23083 117 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 DDTP30046 118 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 UBE2NP61088 152 aaKnown RBP13.68□□□□□ -0.22
LTBR-201ENST00000228918 PSG7Q13046 419 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 ZBTB34Q8NCN2 500 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 S100PBPQ96BU1 408 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 OR2D2Q9H210 308 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms