RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 FOSL1P15407 271 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 DDTP30046 118 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 FAM166AQ6J272 317 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 TAF15Q92804 592 aaKnown RBP eCLIP11.8□□□□□ -0.52
NFKB1-201ENST00000226574 LEAP2Q969E1 77 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 PQLC2LA1A4F0 135 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ZG16O60844 167 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 IGHV3-48P01763 117 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 LTBRP36941 435 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 RNASEKQ6P5S7 137 aaKnown RBP11.79□□□□□ -0.52
NFKB1-201ENST00000226574 RND1Q92730 232 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 CBLN4Q9NTU7 201 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 DECR2Q9NUI1 292 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ELOA3CA0A087WX78 387 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-201ENST00000226574 SNURFLB1AK76 121 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 CYB5R3P00387 301 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-201ENST00000226574 CSN3P07498 182 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 GNG4P50150 75 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 PKIAP61925 76 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 SSPNQ14714 243 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 CSRP2Q16527 193 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ZNF766Q5HY98 468 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 SPNS3Q6ZMD2 512 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ZSWIM8A7E2V4 1837 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 F8VVB4 439 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 F8VWA3 439 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 OR2H2O95918 312 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 IFI6P09912 130 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 SOX8P57073 446 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 CEACAM21Q3KPI0 293 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 SLC23A3Q6PIS1 610 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ANGPTL4Q9BY76 406 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
NFKB1-201ENST00000226574 CTXND1A0A1B0GTU2 59 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 LRRC3CA6NJW4 275 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 TOX3O15405 576 aaPredicted RBP11.78□□□□□ -0.52
NFKB1-201ENST00000226574 HNRNPA3P51991 378 aaKnown RBP11.78□□□□□ -0.52
NFKB1-201ENST00000226574 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
NFKB1-201ENST00000226574 B2MP61769 119 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 CHCHD2Q9Y6H1 151 aaPredicted RBP11.78□□□□□ -0.52
NFKB1-201ENST00000226574 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
NFKB1-201ENST00000226574 OR5I1Q13606 314 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 Q8IYB0 196 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 SGK494Q96LW2 274 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 B4DEV8 164 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 M0R143 59 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 IGHMP01871 453 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 ORM2P19652 201 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 TAS2R45P59539 299 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 M1APQ8TC57 530 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 PCED1AQ9H1Q7 454 aa11.78□□□□□ -0.52
NFKB1-201ENST00000226574 CHEK1O14757 476 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 REG1BP48304 166 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 TCTAP57738 103 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 ERHP84090 104 aaKnown RBP11.77□□□□□ -0.52
NFKB1-201ENST00000226574 PCOLCEQ15113 449 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 MOB1BQ7L9L4 216 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 CISD2Q8N5K1 135 aaKnown RBP11.77□□□□□ -0.52
NFKB1-201ENST00000226574 OR2M7Q8NG81 312 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 FGFBP3Q8TAT2 258 aa11.77□□□□□ -0.52
NFKB1-201ENST00000226574 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 TFF1P04155 84 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.53
NFKB1-201ENST00000226574 OPRK1P41145 380 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 MIC13Q5XKP0 118 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
NFKB1-201ENST00000226574 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 CBY3A6NI87 242 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 LDLRAD4O15165 306 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 CD55P08174 381 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 RNPS1Q15287 305 aaKnown RBP11.77□□□□□ -0.53
NFKB1-201ENST00000226574 PARLQ9H300 379 aa11.77□□□□□ -0.53
NFKB1-201ENST00000226574 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 LOC390937A0A1W2PQ73 354 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 C20orf202A1L168 122 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 WNT9BO14905 357 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 PLAUP00749 431 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 HBZP02008 142 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 VPS25Q9BRG1 176 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 PLXNA3P51805 1871 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 TRGV10A0A0A0MS01 117 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 H0Y980 276 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 MT-CO3P00414 261 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 GLIPR1P48060 266 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 FOXG1P55316 489 aaPredicted RBP11.76□□□□□ -0.53
NFKB1-201ENST00000226574 RTL8BQ17RB0 113 aa11.76□□□□□ -0.53
NFKB1-201ENST00000226574 ABHD12Q8N2K0 398 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms