RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 TPTE2P1Q5T6R2 138 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
RPA3-201ENST00000223129 DUX5Q96PT3 197 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 TOLLIPQ9H0E2 274 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 MEGF9Q9H1U4 602 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 IFI27L2Q9H2X8 130 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
RPA3-201ENST00000223129 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
RPA3-201ENST00000223129 DIRAS3O95661 229 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 OR8U9P0C7N5 309 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 HRH1P35367 487 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 OR3A3P47888 321 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 REG1BP48304 166 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 CDK10Q15131 360 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 Q6YL49 198 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 POC5Q8NA72 575 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 CREB3L1Q96BA8 519 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 PRDM13Q9H4Q3 707 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 TNFRSF19Q9NS68 423 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 HOXA3O43365 443 aaPredicted RBP12.11□□□□□ -0.47
RPA3-201ENST00000223129 OR5H8P0DN80 308 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 CEACAM3P40198 252 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
RPA3-201ENST00000223129 RBMS3Q6XE24 437 aaKnown RBP12.11□□□□□ -0.47
RPA3-201ENST00000223129 LDLRAD3Q86YD5 345 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 OR5H2Q8NGV7 314 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 ZNF418Q8TF45 676 aaPredicted RBP12.11□□□□□ -0.47
RPA3-201ENST00000223129 TOMM40LQ969M1 308 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 ST6GALNAC6Q969X2 333 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 RPEQ96AT9 228 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 EHFQ9NZC4 300 aa12.11□□□□□ -0.47
RPA3-201ENST00000223129 ITGB1BP1O14713 200 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 FCGR2CP31995 323 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 TAS2R46P59540 309 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 ACTBP60709 375 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 ACTG1P63261 375 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 BAMBIQ13145 260 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 Q8N402 240 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 CHAC2Q8WUX2 184 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 SSX3Q99909 188 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 THAP7Q9BT49 309 aaPredicted RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 RBMX2Q9Y388 322 aaKnown RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 SAA2-SAA4A0A096LPE2 208 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 ZNF736B4DX44 427 aaPredicted RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 M0QYG6 137 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 HSD17B6O14756 317 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 CD3DP04234 171 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 RAB7AP51149 207 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 RPL39P5Q59GN2 51 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 SRRQ9GZT4 340 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 OR2W1Q9Y3N9 320 aa12.1□□□□□ -0.47
RPA3-201ENST00000223129 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
RPA3-201ENST00000223129 VENTXO95231 258 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 AADACP22760 399 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 CD24P25063 80 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 PTBP1P26599 531 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPA3-201ENST00000223129 IL3RAP26951 378 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 IER3P46695 156 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 DYRK1AQ13627 763 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 AKAP14Q86UN6 197 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 TINAGL1Q9GZM7 467 aaPredicted RBP12.09□□□□□ -0.47
RPA3-201ENST00000223129 OR2D2Q9H210 308 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 NF1P21359 2839 aa12.09□□□□□ -0.47
RPA3-201ENST00000223129 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 RAB29O14966 203 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 PROP1O75360 226 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 TUSC2O75896 110 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 GAPDHP04406 335 aaKnown RBP12.08□□□□□ -0.48
RPA3-201ENST00000223129 IGKV1-13P0DP09 117 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 ZNF137PP52743 207 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 DEFA1P59665 94 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 DEFA3P59666 94 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 PRIMA1Q86XR5 153 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 OR4D10Q8NGI6 311 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 PIFOQ8TCI5 191 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 RTN4IP1Q8WWV3 396 aaPredicted RBP12.08□□□□□ -0.48
RPA3-201ENST00000223129 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 PIPOXQ9P0Z9 390 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 A0A1W2PPI3 338 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 DNAJC9-AS1A6NH13 148 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 H3BUX3 64 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 TCF21O43680 179 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 GPR12P47775 334 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 TAS2R19P59542 299 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 HILS1P60008 231 aa12.08□□□□□ -0.48
RPA3-201ENST00000223129 SSBP1Q04837 148 aaKnown RBP12.08□□□□□ -0.48
RPA3-201ENST00000223129 ZNF816Q0VGE8 651 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms