RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ABHD14BQ96IU4 210 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 EAF1Q96JC9 268 aaPredicted RBP10.1□□□□□ -0.79
LSM5-201ENST00000223084 AKR1E2Q96JD6 320 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 ST6GALNAC5Q9BVH7 336 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 MRPL20Q9BYC9 149 aaKnown RBP10.1□□□□□ -0.79
LSM5-201ENST00000223084 RNF150Q9ULK6 438 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 WIPF1O43516 503 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 SSX5O60225 188 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 SCGNO76038 276 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 LPLP06858 475 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 GSTP1P09211 210 aaKnown RBP10.09□□□□□ -0.79
LSM5-201ENST00000223084 PTHLHP12272 177 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 CD1BP29016 333 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 VDAC2P45880 294 aaPredicted RBP10.09□□□□□ -0.79
LSM5-201ENST00000223084 GNG2P59768 71 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 LSAMPQ13449 338 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 ARL6IP1Q15041 203 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 CTF1Q16619 201 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 C9orf152Q5JTZ5 239 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 ZNF833PQ6ZTB9 187 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 GPR141Q7Z602 305 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 OR2T10Q8NGZ9 312 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 NABP2Q9BQ15 211 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 ZNF251Q9BRH9 671 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 CABLES2Q9BTV7 478 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 RDH8Q9NYR8 311 aa10.09□□□□□ -0.79
LSM5-201ENST00000223084 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
LSM5-201ENST00000223084 RAB29O14966 203 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 TXNL1O43396 289 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 GABARAPO95166 117 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 MOSP00540 346 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 DTYMKP23919 212 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 KIR2DS1Q14954 304 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 PNLIPRP3Q17RR3 467 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 C11orf88Q6PI97 169 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 Q8N6K4 173 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 SAMD12Q8N8I0 201 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 SGMS2Q8NHU3 365 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 AGMATQ9BSE5 352 aa10.08□□□□□ -0.8
LSM5-201ENST00000223084 TRBV6-7A0A0A0MS04 114 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 M0QZK8 103 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 ITGB1BP1O14713 200 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 TMEM127O75204 238 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 PROP1O75360 226 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 FCER2P06734 321 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 F2RL1P55085 397 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 SRSF7Q16629 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
LSM5-201ENST00000223084 UBE2NLQ5JXB2 153 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 GLDNQ6ZMI3 551 aaPredicted RBP10.07□□□□□ -0.8
LSM5-201ENST00000223084 Q6ZS49 121 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 RITA1Q96K30 269 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 WNT10AQ9GZT5 417 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 DIABLOQ9NR28 239 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 PLSCR3Q9NRY6 295 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 PIPOXQ9P0Z9 390 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 COMMD3Q9UBI1 195 aa10.07□□□□□ -0.8
LSM5-201ENST00000223084 TET2Q6N021 2002 aaPredicted RBP10.06□□□□□ -0.8
LSM5-201ENST00000223084 J3QRK9 145 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 FGF16O43320 207 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 PEX14O75381 377 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 EIF4EP06730 217 aaKnown RBP10.06□□□□□ -0.8
LSM5-201ENST00000223084 CT45A6P0DMU7 189 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 CT45A5P0DMU8 189 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 CT45A7P0DMV0 189 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 CD28P10747 220 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 CNTFRP26992 372 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 GPR12P47775 334 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 LINC00205P59089 165 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 PITPNAQ00169 270 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 FAM131AQ6UXB0 335 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 GVQW1Q8N7I0 195 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 Q8N9W7 124 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 DRAXINQ8NBI3 349 aaPredicted RBP10.06□□□□□ -0.8
LSM5-201ENST00000223084 WIPF2Q8TF74 440 aaPredicted RBP10.06□□□□□ -0.8
LSM5-201ENST00000223084 S100A16Q96FQ6 103 aaKnown RBP10.06□□□□□ -0.8
LSM5-201ENST00000223084 S1PR3Q99500 378 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 GINS4Q9BRT9 223 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 TOLLIPQ9H0E2 274 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 DCSTAMPQ9H295 470 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 AUNIPQ9H7T9 357 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 ZNF221Q9UK13 617 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 TRRAPQ9Y4A5 3859 aa10.06□□□□□ -0.8
LSM5-201ENST00000223084 A0A0A6YYH2 397 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 A6NJ64 397 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 LINC01548A6NM66 108 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 PLXNB1O43157 2135 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 XRCC3O43542 346 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 OR8U9P0C7N5 309 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 RORCP51449 518 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 SPCS2Q15005 226 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 FAM71F2Q6NXP2 309 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 C10orf99Q6UWK7 81 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 CLVS1Q8IUQ0 354 aaPredicted RBP10.05□□□□□ -0.8
LSM5-201ENST00000223084 H1FOOQ8IZA3 346 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms