RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PNRC1Q12796 327 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 FXYD3Q14802 87 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 INPP5JQ15735 1006 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 RAB37Q96AX2 223 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 TMEM186Q96B77 213 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 NEURL2Q9BR09 285 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 HSPB7Q9UBY9 170 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 SVILO95425 2214 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 NKX2-6A6NCS4 301 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 M0R143 59 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 FUCA1P04066 466 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 Q6ZNX1 250 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 MSRB3Q8IXL7 192 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 TMEM52Q8NDY8 209 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 RHOVQ96L33 236 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 SSBP3Q9BWW4 388 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 ZNF385DQ9H6B1 395 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 RCC2Q9P258 522 aaKnown RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 CX3CL1P78423 397 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 KLF14Q8TD94 323 aaPredicted RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 NPFFR1Q9GZQ6 430 aa9.12□□□□□ -0.95
TRPS1-201ENST00000220888 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
TRPS1-201ENST00000220888 A0A1W2PQM1 296 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 H3BVH4 76 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 COX6CP09669 75 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 SMIM18P0DKX4 95 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 RND2P52198 227 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 VAX2Q9UIW0 290 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 LTBP4Q8N2S1 1624 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 A0A0U1RQV5 110 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ASPDHA6ND91 283 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 CBY3A6NI87 242 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 OGG1O15527 345 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 CSRP1P21291 193 aaKnown RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 TMEM50BP56557 158 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ZNF56Q15929 161 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 CTF1Q16619 201 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 TMEM30BQ3MIR4 351 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ANKRD20A5PA0PJZ0 165 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 SNURFLB1AK76 121 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ZNF430Q9H8G1 570 aaPredicted RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ZNF256Q9Y2P7 627 aaPredicted RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 CTXND1A0A1B0GTU2 59 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ZNF729A6NN14 1252 aaPredicted RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 NPFFO15130 113 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 SNRPCP09234 159 aaKnown RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 CSF2RBP32927 897 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 GZMKP49863 264 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 FAM74A4Q5TZK3 123 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ADAD2Q8NCV1 583 aaKnown RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 FAM216AQ8WUB2 273 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 MRPL24Q96A35 216 aaKnown RBP9.11□□□□□ -0.95
TRPS1-201ENST00000220888 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 OR4C45A6NMZ5 311 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 C17orf51A8MQB3 221 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 PRSS2P07478 247 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 TNFSF10P50591 281 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ST3GAL2Q16842 350 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 FAM159AQ6UWV7 190 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 SGK494Q96LW2 274 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 PEMTQ9UBM1 199 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 ST6GALNAC2Q9UJ37 374 aa9.11□□□□□ -0.95
TRPS1-201ENST00000220888 EP300Q09472 2414 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 HIST1H1AQ02539 215 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 ACSF3Q4G176 576 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 TIMM23BQ5SRD1 257 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 TMEM101Q96IK0 257 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 OR4C46A6NHA9 309 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 VSIG8P0DPA2 414 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 CRYBB2P43320 205 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 SSX1Q16384 188 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 SMUG1Q53HV7 270 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 PPP1R32Q7Z5V6 425 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 FAM57AQ8TBR7 257 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 ADAT3Q96EY9 351 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 TBX15Q96SF7 602 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 A8MWL6 223 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 APCSP02743 223 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 ANOS1P23352 680 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 RPL29P47914 159 aaKnown RBP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 SULT1A2P50226 295 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 UBE2DNLQ8IWF7 75 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 ZNF645Q8N7E2 425 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 C8orf46Q8TAG6 207 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 PKIBQ9C010 78 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 TSPAN2O60636 221 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 PLAUP00749 431 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 EMP1P54849 157 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 EWSR1Q01844 656 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRPS1-201ENST00000220888 FAM27E3Q08E93 113 aa9.1□□□□□ -0.95
TRPS1-201ENST00000220888 LYZL2Q7Z4W2 148 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms