RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 MPLP40238 635 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 RHEBQ15382 184 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 TMEM164Q5U3C3 297 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 PCSK4Q6UW60 755 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 FOXL2NBQ6ZUU3 175 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 ZNF610Q8N9Z0 462 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 CLEC18CQ8NCF0 446 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 FAM173AQ9BQD7 235 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 PGPEP1LA6NFU8 196 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 SYNGR2O43760 224 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 SSTR5P35346 364 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 UBE2NP61088 152 aaKnown RBP12.78□□□□□ -0.36
EFNB1-201ENST00000204961 BAXQ07812 192 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 FAM201AQ5SY85 155 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 SCCPDHQ8NBX0 429 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 SLC25A40Q8TBP6 338 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 C14orf144Q96I85 54 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 OPA3Q9H6K4 179 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 CDH20Q9HBT6 801 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.36
EFNB1-201ENST00000204961 ST8SIA5O15466 376 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 GNG3P63215 75 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 DEFB108BQ8NET1 73 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 C10orf35Q96D05 121 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 TRIB1Q96RU8 372 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.36
EFNB1-201ENST00000204961 AKAP13Q12802 2813 aa12.77□□□□□ -0.36
EFNB1-201ENST00000204961 TLN1Q9Y490 2541 aaKnown RBP12.77□□□□□ -0.36
EFNB1-201ENST00000204961 PSPNO60542 156 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 HOXA5P20719 270 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 SLC10A1Q14973 349 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 HEPN1Q6WQI6 88 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 RBKSQ9H477 322 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 A0A087X0M5 115 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 A0A1B0GX30 115 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 CDX1P47902 265 aaPredicted RBP12.77□□□□□ -0.37
EFNB1-201ENST00000204961 KHDC3LQ587J8 217 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 NMSQ5H8A3 153 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 STRADBQ9C0K7 418 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
EFNB1-201ENST00000204961 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 NAPSAO96009 420 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 TLE4Q04727 773 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 WDR86Q86TI4 376 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 TMEM37Q8WXS4 190 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 TAAR9Q96RI9 348 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 ATP5SQ99766 215 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BKO60814 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BJP06899 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BOP23527 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BBP33778 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 MPV17P39210 176 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BDP58876 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BCP62807 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 PRSS8Q16651 343 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST2H2BEQ16778 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.76□□□□□ -0.37
EFNB1-201ENST00000204961 CST9LP1Q5W188 147 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 OR4F5Q8NH21 305 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BHQ93079 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 OR4F4Q96R69 305 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BNQ99877 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 HIST1H2BMQ99879 126 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 DECR2Q9NUI1 292 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 PSG11Q9UQ72 335 aa12.76□□□□□ -0.37
EFNB1-201ENST00000204961 ZG16O60844 167 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 PITX3O75364 302 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 IL18BPO95998 194 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 CHRNA7P36544 502 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 ID3Q02535 119 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 FGFRL1Q8N441 504 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 OR5P3Q8WZ94 311 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 TVP23CQ96ET8 276 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 ELOVL1Q9BW60 279 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 G0S2P27469 103 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF573Q86YE8 665 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 DRAM1Q8N682 238 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 MAP1LC3B2A6NCE7 125 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 NKX2-8O15522 239 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 PRB4P10163 310 aaPredicted RBP12.75□□□□□ -0.37
EFNB1-201ENST00000204961 UCP1P25874 307 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 GLIPR1P48060 266 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 EDDM3BP56851 147 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 HLA-DRB3P79483 266 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 Q3ZCU0 254 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 FRZBQ92765 325 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 RCC1LQ96I51 464 aaKnown RBP12.75□□□□□ -0.37
EFNB1-201ENST00000204961 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 MAP1LC3BQ9GZQ8 125 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms