RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FAM90A9PA6NNJ1 464 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 UNQ9370/PRO34162Q6UXP9 181 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 LINC00696Q6ZRV3 163 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 MOGAT3Q86VF5 341 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 SRD5A3Q9H8P0 318 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TECTAO75443 2155 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 CXCL10P02778 98 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 DDTP30046 118 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 LPAR6P43657 344 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 FAM78BQ5VT40 261 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 HOGA1Q86XE5 327 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 OR10AC1Q8NH08 325 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 NEURL2Q9BR09 285 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 PAXXQ9BUH6 204 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RBMY1BA6NDE4 496 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RBMY1EA6NEQ0 496 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 H3BVH4 76 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 PPM1DO15297 605 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TTRP02766 147 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RBMY1DP0C7P1 496 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RBMY1A1P0DJD3 496 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RBMY1CP0DJD4 496 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 ST3GAL2Q16842 350 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM255AQ5JRV8 349 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 PRSS45Q7RTY3 260 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF519Q8TB69 540 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 PTPMT1Q8WUK0 201 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TEX37Q96LM6 180 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 VSIG4Q9Y279 399 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 BDP1A6H8Y1 2624 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 SNURFLB1AK76 121 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 SMIM13P0DJ93 91 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 CAMPP49913 170 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 KLF9Q13886 244 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 DMKNQ6E0U4 476 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 APOBEC4Q8WW27 367 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 YAE1D1Q9NRH1 226 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 GPR27Q9NS67 375 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 CBLN4Q9NTU7 201 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 HCFC1R1Q9NWW0 138 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 PCNX3Q9H6A9 2034 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 IFITM2Q01629 132 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 OR2Y1Q8NGV0 311 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TUBA4BQ9H853 241 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 LRRK2Q5S007 2527 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 LEUTXA8MZ59 168 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 CYR61O00622 381 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 BOD1L2Q8IYS8 172 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 DEFB119Q8N690 84 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 FMC1Q96HJ9 113 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 QTRT1Q9BXR0 403 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF98A6NK75 572 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 MPTX1A8MV57 137 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 PSG5Q15238 335 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 FAM27BQ5VT28 67 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 SPSB4Q96A44 273 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 FAM131CQ96AQ9 280 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 ALKBH3Q96Q83 286 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 ISG20L2Q9H9L3 353 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 SMPXQ9UHP9 88 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 A0A0B4J293 547 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 J3QR06 171 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 J3QT63 122 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 GCM2O75603 506 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 CMC4P56277 68 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 HBBP68871 147 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 MRPS11P82912 194 aaKnown RBP5.33□□□□□ -1.56
VPS13D-201ENST00000011700 RAB32Q13637 225 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 IGSF11Q5DX21 431 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 BEND2Q8NDZ0 799 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 CACNG8Q8WXS5 425 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 TMUB1Q9BVT8 246 aa5.33□□□□□ -1.56
VPS13D-201ENST00000011700 LINC01553A4QN01 128 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TIAL1Q01085 375 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ANKRD37Q7Z713 158 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 C9orf62Q8N4C0 152 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 OR4P4Q8NGL7 312 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF714Q96N38 554 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ABHD14AQ9BUJ0 271 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 PXMP4Q9Y6I8 212 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 C7orf77A4D0Y5 90 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 FXYD1O00168 92 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 KLF4O43474 513 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 NKG7Q16617 165 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 WDR38Q5JTN6 314 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 GATAD1Q8WUU5 269 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 A0A1W2PNV4 684 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM11P17152 192 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ZP4Q12836 540 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 CBLN2Q8IUK8 224 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 OR10D3Q8NH80 312 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 EMC6Q9BV81 110 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 GPR6P46095 362 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 MFAP2P55001 183 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 PPP2CBP62714 309 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms