RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CTXN2P0C2S0 81 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 CGB3P0DN86 165 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 CGB7P0DN87 165 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 IGHV3-43DP0DP04 118 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 DEFA1P59665 94 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 DEFA3P59666 94 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 PAX2Q02962 417 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 ASAH1Q13510 395 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 DYRK1AQ13627 763 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 GNMTQ14749 295 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 TMEM30BQ3MIR4 351 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 BTNL3Q6UXE8 466 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 OR52L2PQ8NGH6 319 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 OR10V1Q8NGI7 309 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 OR56B4Q8NH76 319 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 DEDD2Q8WXF8 326 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 GALMQ96C23 342 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 C7orf50Q9BRJ6 194 aaKnown RBP7.68□□□□□ -1.18
PHGDH-228ENST00000641847 GINS4Q9BRT9 223 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 LINC00574Q9H8X3 128 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 MCUBQ9NWR8 336 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 IDI2-AS1Q9NZ38 188 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 OR1A1Q9P1Q5 309 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 GNG12Q9UBI6 72 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 ZNF69Q9UC07 566 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 SLC23A1Q9UHI7 598 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 JPT1Q9UK76 154 aa7.68□□□□□ -1.18
PHGDH-228ENST00000641847 POLR3KQ9Y2Y1 108 aaPredicted RBP7.68□□□□□ -1.18
PHGDH-228ENST00000641847 TRBV6-7A0A0A0MS04 114 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 CENPXA8MT69 81 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 C17orf98A8MV24 154 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 DISC1C4P0D8 188 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 J3QLI3 93 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 M0QZ24 198 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 M0R1W7 72 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 PLA2G10O15496 165 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 LYRM1O43325 122 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 MMP23AO75900 390 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 DIRAS3O95661 229 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 RBP4P02753 201 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 OR5H8P0DN80 308 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 IGHV1-8P0DP01 117 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 PRTN3P24158 256 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 NFYBP25208 207 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 PPP1CCP36873 323 aaKnown RBP7.67□□□□□ -1.18
PHGDH-228ENST00000641847 RFX2P48378 723 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 ERVFRD-1P60508 538 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 ARF6P62330 175 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 HTD2P86397 168 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 SCGB2B2Q4G0G5 96 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 FAM53AQ6NSI3 398 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-228ENST00000641847 HEPN1Q6WQI6 88 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 ZNF782Q6ZMW2 699 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-228ENST00000641847 OVCH2Q7RTZ1 564 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 ARRDC1Q8N5I2 433 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 KIR3DL3Q8N743 410 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 ZDHHC22Q8N966 263 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 OR10A7Q8NGE5 316 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 OR10J5Q8NHC4 309 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 C11orf54Q9H0W9 315 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-228ENST00000641847 OR2S2Q9NQN1 319 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 MMP26Q9NRE1 261 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 GFOD1Q9NXC2 390 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 SESN1Q9Y6P5 492 aa7.67□□□□□ -1.18
PHGDH-228ENST00000641847 DOCK11Q5JSL3 2073 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 KIAA2026Q5HYC2 2103 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 hCG_1809904A0A1W2PP81 198 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 A0A1W2PPE2 198 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 A0A1W2PR64 198 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 A0A1W2PRV1 198 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 FAM172BPA6NC97 362 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 NAP1L6A6NFF2 107 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 ZNF735P0CB33 412 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 AADACP22760 399 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 NFYAP23511 347 aaPredicted RBP7.66□□□□□ -1.18
PHGDH-228ENST00000641847 ZBTB25P24278 435 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 FCGR2CP31995 323 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 BTCP35070 178 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 CEACAM6P40199 344 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 LOXL3P58215 753 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 HERV-K104P61576 105 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 TSPAN5P62079 268 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 PRB3Q04118 309 aaPredicted RBP7.66□□□□□ -1.18
PHGDH-228ENST00000641847 METTL11BQ5VVY1 283 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 MZT2BQ6NZ67 158 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 IDO2Q6ZQW0 420 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 VMO1Q7Z5L0 202 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 TMEM17Q86X19 198 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 H1FOOQ8IZA3 346 aaPredicted RBP7.66□□□□□ -1.18
PHGDH-228ENST00000641847 C11orf42Q8N5U0 333 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 Q8N7P7 452 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 POC5Q8NA72 575 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 OR51S1Q8NGJ8 323 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 OR52M1Q8NGK5 317 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 LEAP2Q969E1 77 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 DMRTB1Q96MA1 342 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 PRRT1Q99946 306 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 ZNF2Q9BSG1 426 aaPredicted RBP7.66□□□□□ -1.18
PHGDH-228ENST00000641847 TMPRSS13Q9BYE2 586 aa7.66□□□□□ -1.18
PHGDH-228ENST00000641847 PARP12Q9H0J9 701 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms