RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 LDLRAD2Q5SZI1 272 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 C6orf183Q5T699 404 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 GPR157Q5UAW9 335 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 HACD4Q5VWC8 232 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 NCR3LG1Q68D85 454 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 MOB1BQ7L9L4 216 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 SETD6Q8TBK2 473 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 C17orf50Q8WW18 174 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 AP3S1Q92572 193 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 LEAP2Q969E1 77 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 ZDHHC16Q969W1 377 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 AJUBAQ96IF1 538 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 CMSS1Q9BQ75 279 aaKnown RBP5.96□□□□□ -1.46
PHGDH-225ENST00000641720 NXF2Q9GZY0 626 aaKnown RBP5.96□□□□□ -1.46
PHGDH-225ENST00000641720 PARP12Q9H0J9 701 aaKnown RBP5.96□□□□□ -1.46
PHGDH-225ENST00000641720 TMEM133Q9H2Q1 129 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 TAF9BQ9HBM6 251 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 IDI2-AS1Q9NZ38 188 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 ZNF230Q9UIE0 474 aaPredicted RBP5.96□□□□□ -1.46
PHGDH-225ENST00000641720 TRAPPC2LQ9UL33 140 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 SIGLEC9Q9Y336 463 aa5.96□□□□□ -1.46
PHGDH-225ENST00000641720 KIAA2026Q5HYC2 2103 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 IGKV1D-8A0A087WSZ0 117 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 A0A0A6YYH2 397 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 IGHV2-26A0A0B4J1V2 119 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 IGHV3-43A0A0B4J1X8 118 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 IGKV1-6A0A0C4DH72 117 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 A6NHS1 94 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 A6NJ64 397 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 SERPINE3A8MV23 424 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 F2RL2O00254 374 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 SDCBPO00560 298 aaPredicted RBP5.95□□□□□ -1.46
PHGDH-225ENST00000641720 NPFFO15130 113 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 XRCC3O43542 346 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 ORC5O43913 435 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 SCGNO76038 276 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 IGHV3-43DP0DP04 118 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 NFYBP25208 207 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 PAX6P26367 422 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 SAA4P35542 130 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 HLA-DRB3P79483 266 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 ARFRP1Q13795 201 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 TMEM69Q5SWH9 247 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 ZNF626Q68DY1 528 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 MZT2BQ6NZ67 158 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 CNIH2Q6PI25 160 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 PRR18Q8N4B5 295 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 OR11H6Q8NGC7 330 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 OR10V1Q8NGI7 309 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 ARL11Q969Q4 196 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 EAF1Q96JC9 268 aaPredicted RBP5.95□□□□□ -1.46
PHGDH-225ENST00000641720 WWC2-AS2Q96NR7 200 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 C6orf62Q9GZU0 229 aaPredicted RBP5.95□□□□□ -1.46
PHGDH-225ENST00000641720 Q9N2K0 584 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 OR1A1Q9P1Q5 309 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 VPREB3Q9UKI3 123 aa5.95□□□□□ -1.46
PHGDH-225ENST00000641720 A0A087X0M5 115 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 A0A1B0GX30 115 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 hCG_1809904A0A1W2PP81 198 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 A0A1W2PPE2 198 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 A0A1W2PPE3 182 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 A0A1W2PR64 198 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 WI2-2373I1.2A0A1W2PRP0 233 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 A0A1W2PRV1 198 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 MEIOCA2RUB1 952 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 MEIS3P1A6NDR6 274 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 FAM25AB3EWG3 89 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 FAM25CB3EWG5 89 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 FAM25GB3EWG6 89 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 SLC31A2O15432 143 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 RGS5O15539 181 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 SPINT2O43291 252 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 IGLV1-47P01700 117 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 HLA-DQB1P01920 261 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 FCER2P06734 321 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 SCTP09683 121 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 CD34P28906 385 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 PPP1CCP36873 323 aaKnown RBP5.94□□□□□ -1.46
PHGDH-225ENST00000641720 GNG10P50151 68 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 UBE2E1P51965 193 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 GNG2P59768 71 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 KRTAP10-11P60412 298 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 PNLIPRP3Q17RR3 467 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 RNASE12Q5GAN4 147 aaKnown RBP5.94□□□□□ -1.46
PHGDH-225ENST00000641720 TRAT1Q6PIZ9 186 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 LHFPL4Q7Z7J7 247 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 SNX29P2Q8IUI4 249 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 DYNAPQ8N1N2 210 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 ABHD12Q8N2K0 398 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 GVQW1Q8N7I0 195 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 ZNF565Q8N9K5 539 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 ZNF439Q8NDP4 499 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 OR52L2PQ8NGH6 319 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 OR4P4Q8NGL7 312 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 MCFD2Q8NI22 146 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 DGCR14Q96DF8 476 aaKnown RBP5.94□□□□□ -1.46
PHGDH-225ENST00000641720 S100A16Q96FQ6 103 aaKnown RBP5.94□□□□□ -1.46
PHGDH-225ENST00000641720 CMTM3Q96MX0 182 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 CLEC7AQ9BXN2 247 aa5.94□□□□□ -1.46
PHGDH-225ENST00000641720 RIMS4Q9H426 269 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms