RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RAI1Q7Z5J4 1906 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-221ENST00000641573 TRGV10A0A0A0MS01 117 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 TEX13DA0A0J9YY54 714 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-221ENST00000641573 GPR31O00270 319 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 GOSR2O14653 212 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 HSD17B6O14756 317 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 SLC22A5O76082 557 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 IGHV2-70P01814 119 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 CGB3P0DN86 165 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 CGB7P0DN87 165 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 GNRHRP30968 328 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 EIF2B2P49770 351 aaKnown RBP10.84□□□□□ -0.67
PHGDH-221ENST00000641573 LUMP51884 338 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-221ENST00000641573 HTD2P86397 168 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 GNMTQ14749 295 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 LRRC10Q5BKY1 277 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 AVPI1Q5T686 147 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 LIN54Q6MZP7 749 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 C11orf88Q6PI97 169 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 NLRC3Q7RTR2 1065 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 RTN4IP1Q8WWV3 396 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-221ENST00000641573 CHIAQ9BZP6 476 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 TOLLIPQ9H0E2 274 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 PARP12Q9H0J9 701 aaKnown RBP10.84□□□□□ -0.67
PHGDH-221ENST00000641573 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 SLC2A9Q9NRM0 540 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 BEX4Q9NWD9 120 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-221ENST00000641573 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 CTSZQ9UBR2 303 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
PHGDH-221ENST00000641573 IGHV3-43A0A0B4J1X8 118 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 A0A0B4J2A0 478 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 hADV38S2A0JD32 116 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 INAFM1C9JVW0 142 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 DVL1O14640 695 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 FCN3O75636 299 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 SIX6O95475 246 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 IFNA2P01563 188 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 IGHV3-43DP0DP04 118 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 RND3P61587 244 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 LTC4SQ16873 150 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 C17orf58Q2M2W7 97 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 ANKRD55Q3KP44 614 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 ZFP69Q49AA0 526 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 FAM53AQ6NSI3 398 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-221ENST00000641573 ZNF818PQ6ZRF7 136 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 KCTD9Q7L273 389 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 TCF23Q7RTU1 214 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 FAM185AQ8N0U4 392 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 COQ8AQ8NI60 647 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 CORO2AQ92828 525 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 RAB1CQ92928 201 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 TIMD4Q96H15 378 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 OR2S2Q9NQN1 319 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 PRR13Q9NZ81 148 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 SHPKQ9UHJ6 478 aa10.83□□□□□ -0.68
PHGDH-221ENST00000641573 RBM7Q9Y580 266 aaKnown RBP10.83□□□□□ -0.68
PHGDH-221ENST00000641573 KBTBD11-OT1A0A1B0GTJ5 212 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 RNF212BA8MTL3 300 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 SMLR1H3BR10 107 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 F2RL2O00254 374 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 SMAD7O15105 426 aaKnown RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 MPPED1O15442 326 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 PPIHO43447 177 aaKnown RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 F12P00748 615 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 GIPP09681 153 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 OR8U9P0C7N5 309 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 PPP1CCP36873 323 aaKnown RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 EFNA4P52798 201 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 MEF2CQ06413 473 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 Q5PR19 223 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 OR8U1Q8NH10 309 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 H1FXQ92522 213 aaKnown RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 CHODLQ9H9P2 273 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 C19orf12Q9NSK7 152 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 PIPOXQ9P0Z9 390 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 CLN8Q9UBY8 286 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 JPT1Q9UK76 154 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 KCNIP3Q9Y2W7 256 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 UBE2J1Q9Y385 318 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-221ENST00000641573 DSCAMO60469 2012 aa10.82□□□□□ -0.68
PHGDH-221ENST00000641573 DBX1A6NMT0 343 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 OVOL3O00110 214 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 NDUFS7O75251 213 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 OR2A4O95047 310 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 OR5AC1P0C628 307 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 HLA-GP17693 338 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 RPL31P62899 125 aaKnown RBP10.81□□□□□ -0.68
PHGDH-221ENST00000641573 C11orf91Q3C1V1 193 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 LY6G6FQ5SQ64 297 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 DCAF12L2Q5VW00 463 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 TBC1D26Q86UD7 250 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 CMTM1Q8IZ96 169 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 BVESQ8NE79 360 aa10.81□□□□□ -0.68
PHGDH-221ENST00000641573 OR5M8Q8NGP6 311 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms